نتایج جستجو برای: phylogenetic
تعداد نتایج: 63361 فیلتر نتایج به سال:
canine distemper virus (cdv) creates a very contagious viral multi-systemic canine distemper (cd) disease that affects most species of carnivora order. the virus is genetically heterogeneous, particularly in section of the hemagglutinin (h) gene. sequence analysis of the h gene can be useful to investigate distinction of various lineages related to geographical distribution and cdv molecular ep...
objective: survey of molecular characterization of nucleoprotein gene of h9n2 avian influenza viruses and determination of the genetic relationship of iranian h9n2 viruses and other asian viruses. materials and methods: the nucleoprotein (np) genes from 4 isolates of h9n2 viruses isolated from commercial chickens in iran during 2008-2009 were amplified by rt-pcr method and sequenced. nucleotid...
this study provides new data on chromosomal characteristics and dna barcoding of three endemic loaches of iran: spiny southern loach cobitis linea (heckel, 1847), persian stream loach oxynoemacheilus persa (heckel, 1848) and tongiorgi stream loach oxynoemacheilus tongiorgii (nalbant & bianco, 1998). the chromosomes of these fishes were investigated by examining metaphase chromosome spreads ...
myxosporean taxonomy which is traditionally based on the morphology of the myxospore stage, is in a state of flux given new insights provided by the expanding dataset of dna sequences. to date, more than 40 species of thelohanellus from india have been described according to morphometric characteristics. nevertheless, molecular data on these histozoic myxosporean parasites of freshwater fish ar...
More than 185 species, strains and unclassified Theileria parasites are categorized in the Entrez Taxonomy. The accurate diagnosis and proper identification of the causative agents are important for understanding the epidemiology, prevention and appropriate treatment. This study aims to discuss the importance of two genes of Theileria annulata 18S ribosomal RNA (18S rRNA) and Theileria annulata...
Members of Nemacheilidae Family, Turcinoemacheilus genus were subjected to molecular phylogenetic analysis in this study. This genus was reported in 2009 to inhabit in Karoon River drainage, in contrary to previous assumption that it was the endemic species in the Basin of Tigris River. It was sampled from three stations placed in different tributaries in Karoon drainage and evaluated to unders...
Background and Purpose: Hyphal wall protein 1 (HWP1) is an important adhesin which usually is expressed on the germ tube and hyphal surface produced by different Candida species. The hyphal wall protein-coding gene (HWP1) was evaluated as a novel identification and phylogenetic marker in Candida tropicalis, C. orthopsilosis, C. parapsilosis and C. glabrata. Materials and Methods: Initially, fo...
In this study, phylogenetic relationships and evolutionary trends of morphological characters of Astragalus sects. Acanthophace and Aegacantha were studied using nrDNA ITS and rpl32-trnLUAG datasets while Astragalus stocksii was selected as the outgroup. The phylogenetic results indicated the non-monophyly of A. sect. Acanthophace in its current circumscription due to the distant exclusion of A...
The composition vector (CV) method is an alignment-free method for phylogenetics. Because of its simplicity when compared with the alignment-based methods, the method has been widely discussed lately. There are mainly four steps in the CV method: (1) count the frequency of each k-string in the sequence; (2) construct the composition vector for the sequence; (3) compute the distance between ever...
Consider two phylogenetic networks N and N ′ of size n. The tripartition-based distance finds the proportion of tripartitions which are not shared by N and N . This distance is proposed by Moret et al (2004) and is a generalization of Robinson-Foulds distance, which is orginally used to compare two phylogenetic trees. This paper gives an O(min{kn log n, n logn+ hn})-time algorithm to compute th...
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