by CONRAD V. IBAÑEZ (Under the Direction of Eileen T. Kraemer) ABSTRACT The Genomics Unified Schema (GUS) is a relational database schema that supports a wide range of data types including genomics, gene expression, transcript assemblies, proteomics, and many others. Together with the GUS Application Framework and the GUS Web Development Kit (WDK), GUS is used by many genomics projects and grou...

In Arabidopsis thaliana, acyl-CoA-binding protein 3 ( ACBP3), one of six ACBPs, is unique in terms of the C-terminal location of its acyl-CoA-binding domain. It promotes autophagy-mediated leaf senescence and confers resistance to Pseudomonas syringae pv. tomato DC3000. To understand the regulation of ACBP3, a 1.7 kb 5'-flanking region of ACBP3 and its deletion derivatives were characterized us...

Chimeric mice were produced by aggregating 2 embryos, each of which was homozygous for a different structural allele of the enzyme /?-glucuronidase. The two alleles used were Gus, the 'wild-type' allele, and Gus, an allele whose gene product shows decreased activity in all tissues as well as decreased heat stability. Staining of untreated adult chimeric livers for glucuronidase activity reveale...

Increased salinity, as consequence of the ongoing climate change, has a significant impact on crop production worldwide. The overexpression rice ACYL-COA-BINDING PROTEIN4 (OsACBP4) protects transgenic and Arabidopsis from salinity stress, while OsACBP4-RNAi lines were more susceptible than vector control (VC) wild type (WT). AtACBP2, OsACBP4 homologue, also conferred protection in Arabidopsis. ...

ANTHER INDEHISCENCE FACTOR (AIF), a NAC-like gene, was identified in Arabidopsis. In AIF:GUS flowers, β-glucuronidase (GUS) activity was detected in the anther, the upper parts of the filaments, and in the pollen of stage 7-9 young flower buds; GUS activity was reduced in mature flowers. Yellow fluorescent protein (YFP)+AIF-C fusion proteins, which lacked a transmembrane domain, accumulated in ...

The tomato (Lycopersicon esculentum cv Ailsa Craig) polygalacturonase genes TAPG1 (LYCes;Pga1;2) and TAPG4 (LYCes;Pga1;5) are abundantly expressed in both abscission zones and the pistils of mature flowers. To further investigate the spatial and temporal expression patterns for these genes, the TAPG gene promoters were ligated to beta-glucuronidase (GUS) reporter genes and transformed into toma...

Commercial cultivation of the mushroom fungus, Agaricus bisporus, utilizes a substrate consisting of a lower layer of compost and upper layer of peat. Typically, the two layers are seeded with individual mycelial inoculants representing a single genotype of A. bisporus. Studies aimed at examining the potential of this fungal species as a heterologous protein expression system have revealed unex...