We present a deep convolutional neural network application based on autoencoders aimed at segmentation of increased signal regions in fluid-attenuated inversion recovery magnetic resonance imaging images. The convolutional autoencoders were trained on the publicly available Brain Tumor Image Segmentation Benchmark (BRATS) data set, and the accuracy was evaluated on a data set where 3 expert seg...

This case report describes the use of high-resolution magnetic resonance imaging (HRMRI) to visualize basilar artery atherosclerotic plaque in a patient with a pontine stroke. HRMRI with three-dimensional image acquisition was used to visualize plaque in several planes to localize arterial wall pathology. Fluid attenuated inversion recovery (FLAIR) sequences of the basilar artery showed wall th...

We describe a new sequence, flow artifact-insensitive fluid-attenuated inversion recovery (FAIS-FLAIR), that capitalizes on the advantages of fluid-attenuated inversion recovery (FLAIR) while minimizing FLAIR-related artifacts such as those often encountered in the posterior fossa. Twenty-eight patients with posterior fossa disease underwent FAIS-FLAIR, conventional FLAIR, and spin-echo MR stud...

BACKGROUND AND PURPOSE The aim of this study is to analyze the histological composition of acute arterial thrombi and their MRI signals. METHODS Two different types of experimental thrombi, erythrocyte- and fibrin-rich thrombus, were created and injected into an experimentally formed stenotic common carotid artery in swine. MRI of the in vivo and in vitro samples was obtained immediately afte...

The design of a double inversion recovery (DIR) sequence, to image selectively grey or white brain matter, is described. Suitable choice of inversion times allows either cerebrospinal fluid (CSF) and white matter to be suppressed, to image the cortex alone, or CSF and grey matter to be suppressed, to image the white matter. The DIR sequence was found to give clear delineation of the cerebral co...

By optimizing the inversion time of a 3D inversion-recovery turbo spin-echo sequence at 3T, we obtained separate images of endolymphatic and perilymphatic space 24 hours after intratympanic administration of gadolinium contrast material. In patients with Ménière disease, endolymphatic hydrops were detected not only in the cochlea but also in the vestibule. Fusion of the 2 types of images visual...

Segmentation is an important step for the diagnosis of multiple sclerosis (MS). This paper presents a new approach to the fully automatic segmentation of MS lesions in Fluid Attenuated Inversion Recovery (FLAIR) Magnetic Resonance (MR) images. With the aim of increasing the contrast of the FLAIR MR images with respect to the MS lesions, the proposed method first estimates the fuzzy memberships ...

results the maximum si was obtained at the highest applied flip angle (45°). the linear relationship between si and nanoparticle concentration was seen up to 112.21 and 98.83 μmol fe/l for the short (10°) and the long (45°) flip angles, respectively (r2 = 0.95). these values were reduced up to 48.54 and 42.73 μmol fe/l for these flip angles with r2 of 0.99. conclusions the maximum si will be in...

Introduction: Many clinical MRI protocols use the fluid attenuated inversion recovery (FLAIR) contrast to better delineate tissue abnormalities such as white matter lesions. Most FLAIR protocols acquire data in a 2D fashion. FLAIR images are often degraded by patient motion, especially when scanning uncooperative patients. Typical motion patterns induce inter-slice misalignment, ghosting and bl...

This paper presents a new feature selection approach for automatically extracting multiple sclerosis (MS) lesions in three-dimensional (3D) magnetic resonance (MR) images. Presented method is applicable to different types of MS lesions. In this method, T1, T2, and fluid attenuated inversion recovery (FLAIR) images are firstly preprocessed. In the next phase, effective features to extract MS les...