نتایج جستجو برای: assembling

تعداد نتایج: 9832  

Journal: :Proceedings of the National Academy of Sciences 2018

Journal: :Bulletin of the Chemical Society of Japan 2019

Journal: :IOP Conference Series: Materials Science and Engineering 2015

Journal: :Bioinformatics 2015
Dinghua Li Chi-Man Liu Ruibang Luo Kunihiko Sadakane Tak Wah Lam

MEGAHIT is a NGS de novo assembler for assembling large and complex metagenomics data in a time- and cost-efficient manner. It finished assembling a soil metagenomics dataset with 252 Gbps in 44.1 and 99.6 h on a single computing node with and without a graphics processing unit, respectively. MEGAHIT assembles the data as a whole, i.e. no pre-processing like partitioning and normalization was n...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2016
Yu Lin Jeffrey Yuan Mikhail Kolmogorov Max W Shen Mark Chaisson Pavel A Pevzner

The recent breakthroughs in assembling long error-prone reads were based on the overlap-layout-consensus (OLC) approach and did not utilize the strengths of the alternative de Bruijn graph approach to genome assembly. Moreover, these studies often assume that applications of the de Bruijn graph approach are limited to short and accurate reads and that the OLC approach is the only practical para...

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