Modern genomics experiments measure functional behaviors for many thousands of DNA sequences. Using correlation functions between sequences and measured behaviors, we developed a simple physical model interpreting such experimental outputs. Analysis recent high throughput data on mechanics shows that this is highly effective, leading directly to the extraction distinct features flexibility pred...

these are notes from introductory survey lectures given at the institute for studies in theoretical physics and mathematics (ipm), teheran, in 2008 and 2010. we present the definition and the fundamental properties of fomin-zelevinsky’s cluster algebras. then, we introduce quiver representations and show how they can be used to construct cluster variables, which are the canonical generators of ...

We construct a physics-agnostic approach to the neutron star (NS) equation of state (EoS) based on sound speed model, which connects both low-density information from nuclear theory and high-density constraints perturbative quantum chromodynamics (pQCD). Using this approach, we study impact pQCD calculations NS EoS that have been constrained by astrophysical observations. find affects mainly be...

We point out that dark matter which is produced non-adiabatically in a phase transition (PT) with fast bubble walls receives boost velocity leads to long free-streaming lengths. find this could be observed via the suppressed power spectrum for masses around $10^8 - 10^9$ GeV and energy scales of PT $10^{2} 10^3$ GeV. The should take place at border supercooled regime, i.e. approximately when Un...

Problem: distinguish chance regularities from causal regularities. Lewis’s solution: use ideal theory – promote those regularities to causal that, under reflective equilibrium, given all the evidence, retain their regularity under a nearest possible worlds account of counterfactuals Thus, R2: A causes B iff B is later than A and there is a constant conjunction of events of type A and type B in ...

We provided a cross-tissue comparative analysis of between-subtype molecular commonality for ovarian cancer, breast cancer, hepatocellular carcinoma, glioma, lung squamous carcinoma and nasopharyngeal carcinoma. Our analysis showed that molecular subtypes with similar phenotype or similar clinical outcome could be correlated by their transcriptional profile and pathway profile. Pathway dysregul...

there are many different ways to subdivide the spectrum of a bounded linear operator; some of them aremotivated by applications to physics (in particular, quantum mechanics). in this study, the relationship betweenthe subdivisions of spectrum which are not required to be disjoint and goldberg's classification are given.moreover, these subdivisions for some summability methods are studied.