نتایج جستجو برای: polyphen

تعداد نتایج: 251  

2014
Amar Al-Shibli Madinah Yusuf Issam Abounajab Patrick J Willems

Patients with renal diseases associated with salt-losing tubulopathies categorized as Gitelman and classic form of Bartter syndrome have undergone genetic screening for possible mutation capture in two different genes: SLC12A3 and CLCNKB. Clinical symptoms of these two diseases may overlap. Bartter syndrome and Gitelman syndrome are autosomal recessive salt-losing tubulopathies with hypokalemia...

2015
Hsiao-Yuan Tang Ping Fang Jerry W Lin Sandra Darilek Brooke T Osborne Jo Ann Haymond Spiros Manolidis Benjamin B Roa John S Oghalai Raye L Alford

OBJECTIVES Aetiological assessment of 71 probands whose clinical presentation suggested a genetic syndrome or auditory neuropathy. METHODS Sanger sequencing was performed on DNA isolated from peripheral blood or lymphoblastoid cell lines. Genes were selected for sequencing based on each patient's clinical presentation and suspected diagnosis. Observed DNA sequence variations were assessed for...

2012
Marina Capuano Carmen Maria Garcia-Herrero Nadia Tinto Carla Carluccio Valentina Capobianco Iolanda Coto Arturo Cola Dario Iafusco Adriana Franzese Adriana Zagari Maria Angeles Navas Lucia Sacchetti

Type 2 Maturity Onset Diabetes of the Young (MODY2) is a monogenic autosomal disease characterized by a primary defect in insulin secretion and hyperglycemia. It results from GCK gene mutations that impair enzyme activity. Between 2006 and 2010, we investigated GCK mutations in 66 diabetic children from southern Italy with suspected MODY2. Denaturing High Performance Liquid Chromatography (DHPL...

2014
Vijay Kumar Saxena Bipul Kumar Jha Amar Singh Meena S.M.K. Naqvi

Melatonin receptor 1A gene is the prime receptor mediating the effect of melatonin at the neuroendocrine level for control of seasonal reproduction in sheep. The aims of this study were to examine the polymorphism pattern of coding sequence of MTNR1A gene in Chokla sheep, a breed of Indian arid tract and to identify new variations in relation to its aseasonal status. Genomic DNAs of 101 Chokla ...

2014
D. Toncheva M. Mihailova-Hristova R. Vazharova R. Staneva S. Karachanak P. Dimitrov V. Simeonov S. Ivanov L. Balabanski D. Serbezov M. Malinov V. Stefanovic R. Čukuranović M. Polenakovic L. Jankovic-Velickovic V. Djordjevic T. Jevtovic-Stoimenov D. Plaseska-Karanfilska A. Galabov V. Djonov I. Dimova

Balkan endemic nephropathy (BEN) is a familial chronic tubulointerstitial disease with insidious onset and slow progression leading to terminal renal failure. The results of molecular biological investigations propose that BEN is a multifactorial disease with genetic predisposition to environmental risk agents. Exome sequencing of 22 000 genes with Illumina Nextera Exome Enrichment Kit was perf...

Journal: :Genetics and molecular research : GMR 2016
E Stur R S Reis L P Agostini A M A Silva-Conforti I D Louro

Lesch-Nyhan syndrome (LNS) is an X-linked recessive disorder caused by a deficiency of hypoxanthine-guanine phosphoribosyltransferase (HPRT), an enzyme encoded by the HPRT1 gene. The classic disease phenotype described by Lesch and Nyhan in 1964 includes hyperuricemia, mental retardation, severe motor deficiency, and recurring self-mutilation. Here, we report the case of a family with 4 affecte...

Journal: :Biochimie 2008
R Rajasekaran C George Priya Doss C Sudandiradoss K Ramanathan Rao Sethumadhavan

In this study, we identified the most deleterious nsSNP in CDKN2A gene through structural and functional properties of its protein (p16INK4A) and investigated its binding affinity with cdk6. Out of 118 SNPs, 14 are nsSNPs in the coding region and 17 SNPs were found in the untranslated region (UTR). FastSNP suggested that 7 SNPs in the 5' UTR might change the protein expression levels. Sixty-fou...

2015
Dominik G. Grimm Chloé‐Agathe Azencott Fabian Aicheler Udo Gieraths Daniel G. MacArthur Kaitlin E. Samocha David N. Cooper Peter D. Stenson Mark J. Daly Jordan W. Smoller Laramie E. Duncan Karsten M. Borgwardt

Prioritizing missense variants for further experimental investigation is a key challenge in current sequencing studies for exploring complex and Mendelian diseases. A large number of in silico tools have been employed for the task of pathogenicity prediction, including PolyPhen-2, SIFT, FatHMM, MutationTaster-2, MutationAssessor, Combined Annotation Dependent Depletion, LRT, phyloP, and GERP++,...

2015
Rakesh Kumar Majhi Somdatta Saha Ashutosh Kumar Arijit Ghosh Nirlipta Swain Luna Goswami Pratyush Mohapatra Apratim Maity Vivek Kumar Sahoo Abhishek Kumar Chandan Goswami Mikhail Gelfand

Transient Receptor Potential cation channel, subfamily Melastatin, member 8 (TRPM8) is involved in detection of cold temperature, different noxious compounds and in execution of thermo- as well as chemo-sensitive responses at cellular levels. Here we explored the molecular evolution of TRPM8 by analyzing sequences from various species. We elucidate that several regions of TRPM8 had different le...

2017
Chiara Cimmaruta Ludovica Liguori Maria Monticelli Giuseppina Andreotti Valentina Citro

BACKGROUND Rare diseases represent a challenge for physicians because patients are rarely seen, and they can manifest with symptoms similar to those of common diseases. In this work, genetic confirmation of diagnosis is derived from DNA sequencing. We present a tutorial for the molecular analysis of a rare disease using Fabry disease as an example. METHODS An exonic sequence derived from a hy...

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