نتایج جستجو برای: microsatellite repeats

تعداد نتایج: 42630  

Journal: :American journal of botany 2010
Susan M Kabat Christopher W Dick Mark D Hunter

PREMISE OF THE STUDY Microsatellite primers were developed for the common milkweed, Asclepias syriaca L., to assist in genet identification and the analysis of spatial genetic structure. METHODS AND RESULTS Using an enrichment cloning protocol, eight microsatellite loci were isolated and characterized in a Michigan population of A. syriaca. The primers amplified di- and trinucleotide repeats ...

Journal: :The Journal of biological chemistry 2009
Jason R O'Rourke Maurice S Swanson

Recent mapping of functional sequence elements in the human genome has led to the realization that transcription is pervasive and that noncoding RNAs compose a significant portion of the transcriptome. Some dominantly inherited neurological disorders are associated with the expansion of microsatellite repeats in noncoding regions that result in the synthesis of pathogenic RNAs. Here, we review ...

2013
Chang-Mei Chen Shi-Jie Han Shu-Sheng Yuan Chun-Jing Wang Jing-Hua Yu

UNLABELLED PREMISE OF THE STUDY Fifty microsatellite loci were developed for the endangered species Juglans mandshurica to investigate its genetic diversity and population structure. • METHODS AND RESULTS In all, 50 microsatellite markers were isolated from J. mandshurica, using the Fast Isolation by AFLP of Sequences COntaining repeats (FIASCO) protocol. Twenty of these polymorphic marker...

Journal: :American journal of botany 2010
Lu Zhang Qiao-Ming Li

UNLABELLED • PREMISE OF THE STUDY The development of microsatellite primers in the endangered species Dracaena cambodiana will be the foundation for genetic and conservation studies of D. cambodiana and several Dracaena species. • METHODS AND RESULTS A total of 26 microsatellite markers were developed in Chinese populations of D. cambodiana, using the Fast Isolation by AFLP of Sequences Con...

2017
Murugan Sumathi Yasodha Ramasamy

The genus Eucalyptus encompasses several species of industrial importance. Many of these species have been subjected to genetic characterization using different kinds of DNA markers. More than 1000 microsatellites have been identifi ed from the genome of eucalypts and they are highly amenable for cross species transferability. During cross amplifi cation of microsatellites, homoplasy is reporte...

2015
Rosalía Piñeiro Adrien Staquet Olivier J. Hardy

PREMISE OF THE STUDY Microsatellite markers were isolated in the rainforest tree Lophira alata (Ochnaceae), an important timber tree from Central Africa, and cross-amplified on its savannah counterpart, L. lanceolata. METHODS AND RESULTS From a microsatellite-enriched library sequenced on a 454 GS FLX platform, 13 primer combinations were identified. Amplification was optimized in two multipl...

2013
Francesco Dal Grande Andreas Beck Garima Singh Imke Schmitt

UNLABELLED PREMISE OF THE STUDY Polymorphic microsatellite markers were developed for the symbiotic green alga Trebouxia decolorans to study fine-scale population structure and clonal diversity. • METHODS AND RESULTS Using Illumina pyrosequencing, 20 microsatellite primer sets were developed for T. decolorans. The primer sets were tested on 43 individuals sampled from four subpopulations i...

Journal: :Cancer research 2008
Astrid C Haugen Ajay Goel Kanae Yamada Giancarlo Marra Thuy-Phuong Nguyen Takeshi Nagasaka Shinsaku Kanazawa Junichi Koike Yoshinori Kikuchi Xiaoling Zhong Michitsune Arita Kazutoshi Shibuya Mitsuo Oshimura Hiromichi Hemmi C Richard Boland Minoru Koi

Microsatellite instability (MSI) is a hallmark of mismatch repair (MMR) deficiency. High levels of MSI at mononucleotide and dinucleotide repeats in colorectal cancer (CRC) are attributed to inactivation of the MMR genes, hMLH1 and hMSH2. CRC with low levels of MSI (MSI-L) exists; however, its molecular basis is unclear. There is another type of MSI--elevated microsatellite alterations at selec...

Amiripour, Mahboubeh , Sadat Noori, Seyed Ahmad , Shariati, Vahid , Soltani Howyzeh, Mehdi ,

The medicinal plant, Trachyspermum ammi is a rich source of active pharmaceutical ingredients with pharmaceutics effects. Microsatellite markers play a key role in the genome and gene expression, especially in secondary metabolite biosynthesis in medicinal plants. For the first time, transcriptome sequencing of this herb medicine was carried out to identify the microsatellite markers of this sp...

2016
Emily M. Lewis Jeremie B. Fant Michael J. Moore Amy P. Hastings Erica L. Larson Anurag A. Agrawal Krissa A. Skogen

PREMISE OF THE STUDY Eleven nuclear and four plastid microsatellite markers were screened for two gypsum endemic species, Oenothera gayleana and O. hartwegii subsp. filifolia, and tested for cross-amplification in the remaining 11 taxa within Oenothera sect. Calylophus (Onagraceae). METHODS AND RESULTS Microsatellite markers were tested in two to three populations spanning the ranges of both ...

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