نتایج جستجو برای: large genomic rearrangements

تعداد نتایج: 1142013  

Journal: :Cell 2011
Pengfei Liu Ayelet Erez Sandesh C. Sreenath Nagamani Shweta U. Dhar Katarzyna E. Kołodziejska Avinash V. Dharmadhikari M. Lance Cooper Joanna Wiszniewska Feng Zhang Marjorie A. Withers Carlos A. Bacino Luis Daniel Campos-Acevedo Mauricio R. Delgado Debra Freedenberg Adolfo Garnica Theresa A. Grebe Dolores Hernández-Almaguer LaDonna Immken Seema R. Lalani Scott D. McLean Hope Northrup Fernando Scaglia Lane Strathearn Pamela Trapane Sung-Hae L. Kang Ankita Patel Sau Wai Cheung P. J. Hastings Paweł Stankiewicz James R. Lupski Weimin Bi

Complex genomic rearrangements (CGRs) consisting of two or more breakpoint junctions have been observed in genomic disorders. Recently, a chromosome catastrophe phenomenon termed chromothripsis, in which numerous genomic rearrangements are apparently acquired in one single catastrophic event, was described in multiple cancers. Here, we show that constitutionally acquired CGRs share similarities...

Journal: :JAMA 2006
Tom Walsh Silvia Casadei Kathryn Hale Coats Elizabeth Swisher Sunday M Stray Jake Higgins Kevin C Roach Jessica Mandell Ming K Lee Sona Ciernikova Lenka Foretova Pavel Soucek Mary-Claire King

CONTEXT Genetic testing for inherited mutations in BRCA1 and BRCA2 has become integral to the care of women with a severe family history of breast or ovarian cancer, but an unknown number of patients receive negative (ie, wild-type) results when they actually carry a pathogenic BRCA1 or BRCA2 mutation. Furthermore, other breast cancer genes generally are not evaluated. OBJECTIVE To determine ...

Journal: :Cancer research 2002
Françoise Charbonnier Sylviane Olschwang Qing Wang Cécile Boisson Cosette Martin Marie-Pierre Buisine Alain Puisieux Thierry Frebourg

To estimate the relative frequency of mismatch repair genes, rearrangements in hereditary nonpolyposis colorectal cancer (HNPCC) families without detectable mutations in MSH2 or MLH1, we have analyzed by multiplex PCR of short fluorescent fragments MSH2, MLH1, and MSH6 in 61 families, either fulfilling Amsterdam criteria or including cases of multiple primary cancers belonging to the HNPCC spec...

2004
Katherina Walz Patricia Fonseca James R. Lupski

Genomic disorders refer to a group of syndromes caused by DNA rearrangements, such as deletions and duplications, which result in an alteration of normal gene dosage. The chromosomal rearrangements are usually relatively small and often difficult to detect cytogenetically. In a subset of such conditions the rearrangements comprise multiple unrelated contiguous genes that are physically linked a...

Journal: :Journal of medical genetics 2003
J Plaschke J Rüschoff H K Schackert

BACKGROUND Germline mutations in mismatch repair genes, mainly in hMLH1, hMSH2, and hMSH6, predispose to the hereditary non-polyposis colorectal cancer (HNPCC) syndrome. A substantial fraction of these mutations exists in genomic rearrangements of hMSH2 and hMLH1. In contrast, genomic rearrangements have not been reported in hMSH6. METHODS Out of 15 HNPCC or HNPCC-like patients who developed ...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2009
Qi Zhao Otavia L Caballero Samuel Levy Brian J Stevenson Christian Iseli Sandro J de Souza Pedro A Galante Dana Busam Margaret A Leversha Kalyani Chadalavada Yu-Hui Rogers J Craig Venter Andrew J G Simpson Robert L Strausberg

We have identified new genomic alterations in the breast cancer cell line HCC1954, using high-throughput transcriptome sequencing. With 120 Mb of cDNA sequences, we were able to identify genomic rearrangement events leading to fusions or truncations of genes including MRE11 and NSD1, genes already implicated in oncogenesis, and 7 rearrangements involving other additional genes. This approach de...

Journal: :Genome research 2003
Kelly A Frazer Xiyin Chen David A Hinds P V Krishna Pant Nila Patil David R Cox

Comparative DNA sequence studies between humans and nonhuman primates will be important for understanding the genetic basis of the phenotypic differences between these species. Here we compare approximately 27 Mb of human chromosome 21 with chimpanzee DNA sequences identifying 57 genomic rearrangements (deletions and insertions ranging in size from 0.2 to 8.0 kb) between the two species. These ...

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