نتایج جستجو برای: alternatively spliced transcript

تعداد نتایج: 58098  

2013
Ridvan Eksi Hongdong Li Rajasree Menon Yuchen Wen Gilbert S. Omenn Matthias Kretzler Yuanfang Guan

Integrating large-scale functional genomic data has significantly accelerated our understanding of gene functions. However, no algorithm has been developed to differentiate functions for isoforms of the same gene using high-throughput genomic data. This is because standard supervised learning requires 'ground-truth' functional annotations, which are lacking at the isoform level. To address this...

Journal: :Nucleic acids research 2001
X Yi J W Shay W E Wright

Telomerase is a reverse transcriptase that adds telomeric repeats to chromosomal ends. In most normal human somatic cells, telomerase is repressed and telomeres progressively shorten, leading to limited proliferative life-span. Telomerase reactivation is associated with cellular immortalization and is a frequent event during tumorigenesis. The telomerase ribonucleoprotein complex consists of tw...

Journal: :Endocrine-related cancer 2011
Scott M Dehm Donald J Tindall

Alternative splicing is an important mechanism for increasing functional diversity from a limited set of genes. Deregulation of this process is common in diverse pathologic conditions. The androgen receptor (AR) is a steroid receptor transcription factor with functions critical for normal male development as well as the growth and survival of normal and cancerous prostate tissue. Studies of AR ...

Journal: :Nucleic acids research 1994
S Stamm M Q Zhang T G Marr D M Helfman

Alternative splicing is an important regulatory mechanism to create protein diversity. In order to elucidate possible regulatory elements common to neuron specific exons, we created and statistically analysed a database of exons that are alternatively spliced in neurons. The splice site comparison of alternatively and constitutively spliced exons reveals that some, but not all alternatively spl...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 1997
M Morrison K S Harris M B Roth

The expression of alternatively spliced mRNAs from genes is an ubiquitous phenomenon in metazoa. A screen for trans-acting factors that alter the expression of alternatively spliced mRNAs reveals that the smg genes of Caenorhabditis elegans participate in this process. smg genes have been proposed to function in degradation of nonsense mutant mRNAs. Here we show that smg genes affect normal gen...

Abolghasem Ajami Mohsen Tehrani, Nasim Hafezi Reza Alizadeh-Navaei Touraj Farazmandfar Vahid Hosseini

Background: CD1d presents glycolipid antigens to invariant natural killer T (iNKT) cells. The role of CD1d in the development of peptic ulcer and gastric cancer has not been revealed, yet. Objective: To clarify the expression of alternatively spliced variants of CD1d in peptic ulcer and gastric cancer. Methods: Patients with dyspepsia were selected and divided into three groups of non-ulcer dys...

2017
Runxuan Zhang Cristiane P. G. Calixto Yamile Marquez Peter Venhuizen Nikoleta A. Tzioutziou Wenbin Guo Mark Spensley Juan Carlos Entizne Dominika Lewandowska Sara ten Have Nicolas Frei dit Frey Heribert Hirt Allan B. James Hugh G. Nimmo Andrea Barta Maria Kalyna John W. S. Brown

Alternative splicing generates multiple transcript and protein isoforms from the same gene and thus is important in gene expression regulation. To date, RNA-sequencing (RNA-seq) is the standard method for quantifying changes in alternative splicing on a genome-wide scale. Understanding the current limitations of RNA-seq is crucial for reliable analysis and the lack of high quality, comprehensiv...

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