نتایج جستجو برای: روش های ngs

تعداد نتایج: 596378  

Journal: :Investigative ophthalmology & visual science 2015
Robert Wojciechowski

Recent advances in sequencing technology have allowed researchers to probe the human genome at unprecedented depths. Nextgeneration sequencing (NGS) is rapidly transforming clinical genetics. However, significant barriers remain to the routine adoption of NGS in clinical care. Although NGS has become more affordable—an entire human genome can be sequenced for less than $2000—the bottleneck has ...

Journal: :Molecular ecology 2014
Kimberly R Andrews Gordon Luikart

Next-generation sequencing (NGS) technology is revolutionizing the fields of population genetics, molecular ecology and conservation biology. But it can be challenging for researchers to learn the new and rapidly evolving techniques required to use NGS data. A recent workshop entitled 'Population Genomic Data Analysis' was held to provide training in conceptual and practical aspects of data pro...

2017
Christopher A. Lavender Andrew J. Shapiro Adam B. Burkholder Brian D. Bennett Karen Adelman David C. Fargo

Established and emerging next generation sequencing (NGS)-based technologies allow for genome-wide interrogation of diverse biological processes. However, accessibility of NGS data remains a problem, and few user-friendly resources exist for integrative analysis of NGS data from different sources and experimental techniques. Here, we present Online Resource for Integrative Omics (ORIO; https://...

2012
Seth A. Faith Dan Bornman Steve Rust Gene Godbold Christine Baker Boyu Yang Curt Barden Scott Nelson Laura Aume Jeremy Craft Jacquelyn Walther Angela Minard-Smith Pearlly Yan Benjamin Rodriguez Ralf Bundschuh Michael Dickens Brian Young

Next-Generation Sequencing (NGS) has the potential to be the ultimate genotyping platform for human identification. NGS is capable of typing the currently important forensic markers, such as short tandem repeats (STRs), mitochondrial and Y-chromosome haplotypes. Using the same DNA sample, NGS is also capable of typing other polymorphisms including single nucleotide polymorphisms (SNPs) that can...

2017
Hyung Seok Park Seo-Jin Park Jee Ye Kim Sanghwa Kim Jaegyu Ryu Joohyuk Sohn Seho Park Gun Min Kim In Sik Hwang Jong-Rak Choi Seung Il Kim

PURPOSE We evaluated the clinical role of rapid next-generation sequencing (NGS) for identifying BRCA1/2 mutations compared to traditional Sanger sequencing. METHODS Twenty-four paired samples from 12 patients were analyzed in this prospective study to compare the performance of NGS to the Sanger method. Both NGS and Sanger sequencing were performed in 2 different laboratories using blood sam...

2013
Jing-Woei Li Dan M. Bolser Magnus Manske Federico Manuel Giorgi Nikolay Vyahhi Björn Usadel Bernardo J. Clavijo Ting-Fung Chan Nathalie Wong Daniel R. Zerbino Maria Victoria Schneider

Next-generation sequencing (NGS) is increasingly being adopted as the backbone of biomedical research. With the commercialization of various affordable desktop sequencers, NGS will be reached by increasing numbers of cellular and molecular biologists, necessitating community consensus on bioinformatics protocols to tackle the exponential increase in quantity of sequence data. The current resour...

Journal: :Blood 2015
Michael A Pulsipher Chris Carlson Bryan Langholz Donna A Wall Kirk R Schultz Nancy Bunin Ilan Kirsch Julie M Gastier-Foster Michael Borowitz Cindy Desmarais David Williamson Michael Kalos Stephan A Grupp

Positive detection of minimal residual disease (MRD) by multichannel flow cytometry (MFC) prior to hematopoietic cell transplantation (HCT) of patients with acute lymphoblastic leukemia (ALL) identifies patients at high risk for relapse, but many pre-HCT MFC-MRD negative patients also relapse, and the predictive power MFC-MRD early post-HCT is poor. To test whether the increased sensitivity of ...

2016
Matthew C. Hiemenz Stephan Kadauke David B. Lieberman David B. Roth Jianhua Zhao Christopher D. Watt Robert D. Daber Jennifer J. D. Morrissette

Next-generation sequencing (NGS) is a powerful platform for identifying cancer mutations. Routine clinical adoption of NGS requires optimized quality control metrics to ensure accurate results. To assess the robustness of our clinical NGS pipeline, we analyzed the results of 304 solid tumor and hematologic malignancy specimens tested simultaneously by NGS and one or more targeted single-gene te...

Journal: :Human immunology 2015
Steven J Mack Robert P Milius Benjamin D Gifford Jürgen Sauter Jan Hofmann Kazutoyo Osoegawa James Robinson Mathijs Groeneweg Gregory S Turenchalk Alex Adai Cherie Holcomb Erik H Rozemuller Maarten T Penning Michael L Heuer Chunlin Wang Marc L Salit Alexander H Schmidt Peter R Parham Carlheinz Müller Tim Hague Gottfried Fischer Marcelo Fernandez-Viňa Jill A Hollenbach Paul J Norman Martin Maiers

The development of next-generation sequencing (NGS) technologies for HLA and KIR genotyping is rapidly advancing knowledge of genetic variation of these highly polymorphic loci. NGS genotyping is poised to replace older methods for clinical use, but standard methods for reporting and exchanging these new, high quality genotype data are needed. The Immunogenomic NGS Consortium, a broad collabora...

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