نتایج جستجو برای: ssr marker

تعداد نتایج: 134352  

2015
Manu Kumar Ju-Young Choi Nisha Kumari Ashwani Pareek Seong-Ryong Kim

Salinity is one of the important abiotic factors for any crop management in irrigated as well as rainfed areas, which leads to poor harvests. This yield reduction in salt affected soils can be overcome by improving salt tolerance in crops or by soil reclamation. Salty soils can be reclaimed by leaching the salt or by cultivation of salt tolerance crops. Salt tolerance is a quantitative trait co...

2012
Stéphanie Barthe Felix Gugerli Noelle A. Barkley Laurent Maggia Céline Cardi Ivan Scotti

Simple sequence repeat (SSR) markers are widely used tools for inferences about genetic diversity, phylogeography and spatial genetic structure. Their applications assume that variation among alleles is essentially caused by an expansion or contraction of the number of repeats and that, accessorily, mutations in the target sequences follow the stepwise mutation model (SMM). Generally speaking, ...

Journal: :Genetics and molecular research : GMR 2013
L-F Jiang X-Q Zhang X Ma L-K Huang W-G Xie Y-M Ma Y-F Zhao

The accurate identification of orchardgrass (Dactylis glomerata L.) cultivars is necessary to ensure purity for consumers, the effective utilization of cultivars, and to protect the intellectual property for breeders. Therefore, this study aimed to use SSR to construct DNA fingerprinting of orchardgrass cultivars. The genetic diversity of 32 orchardgrass cultivars originated from 21 countries, ...

2014
W. C. Botes D. Bitalo

Article history: Received on: 26/11/2013 Revised on: 08/12/2013 Accepted on: 14/12/2013 Available online: 31/12/2013 Hexaploid triticale (x Triticosecale Wittmack) is a man-made hybrid that consists of 3 genomes, A, B and R, the Aand B-genome from wheat and the R-genome from rye. Simple sequence repeat (SSR) markers are transferable between closely related species. The aim of this study was to ...

Journal: :Genetics and molecular research : GMR 2014
N K Korir W Diao R Tao X Li E Kayesh A Li W Zhen S Wang

The genetic diversity and relationship of 42 tomato varieties sourced from different geographic regions was examined with EST-SSR markers. The genetic diversity was between 0.18 and 0.77, with a mean of 0.49; the polymorphic information content ranged from 0.17 to 0.74, with a mean of 0.45. This indicates a fairly high degree of diversity among these tomato varieties. Based on the cluster analy...

2012
Ranjan Sarmah Jagajjit Sahu Budheswar Dehury Kishore Sarma Smita Sahoo Mousumi Sahu Madhumita Barooah Priyabrata Sen Mahendra Kumar Modi

UNLABELLED With the advent of high-throughput sequencing technology, sequences from many genomes are being deposited to public databases at a brisk rate. Open access to large amount of expressed sequence tag (EST) data in the public databases has provided a powerful platform for simple sequence repeat (SSR) development in species where sequence information is not available. SSRs are markers of ...

2014
Zan Wang Guohui Yu Binbin Shi Xuemin Wang Haiping Qiang Hongwen Gao

Sufficient codominant genetic markers are needed for various genetic investigations in alfalfa since the species is an outcrossing autotetraploid. With the newly developed next generation sequencing technology, a large amount of transcribed sequences of alfalfa have been generated and are available for identifying SSR markers by data mining. A total of 54,278 alfalfa non-redundant unigenes were...

Journal: :Genetics and molecular research : GMR 2016
Y Y Wu J B He A H Li N Y Fang W W He L L Dang G Y Zeng J Huang Y M Bao H S Zhang

Rice blast caused by Magnaporthe oryzae is one of the most devastating rice diseases worldwide. To understand the genetic diversity of indica landrace accessions and identify simple sequence repeat (SSR) markers that are associated with blast resistance, a population of 276 indica landraces from across the world was constructed. This population was then used to evaluate the blast-resistance phe...

2011
Kenta Shirasawa Maki Oyama Hideki Hirakawa Shusei Sato Satoshi Tabata Takashi Fujioka Chiaki Kimizuka-Takagi Shigemi Sasamoto Akiko Watanabe Midori Kato Yoshie Kishida Mitsuyo Kohara Chika Takahashi Hisano Tsuruoka Tsuyuko Wada Takako Sakai Sachiko Isobe

Raphanus sativus (2n = 2x = 18) is a widely cultivated member of the family Brassicaceae, for which genomic resources are available only to a limited extent in comparison to many other members of the family. To promote more genetic and genomic studies and to enhance breeding programmes of R. sativus, we have prepared genetic resources such as complementary DNA libraries, expressed sequences tag...

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