Plant biologists have an enduring interest in assessing components of plant fitness and determining limits to seed set. Consequently, the relative contributions of resource and pollinator availability have been documented for a large number of plant species. We experimentally examined the roles of resource and pollen availability on seed set by the northern pitcher plant Sarracenia purpurea. We...

Methods for ranking the importance of nodes in a network have a rich history in machine learning and across domains that analyze structured data. Recent work has evaluated these methods through the "seed set expansion problem": given a subset [Formula: see text] of nodes from a community of interest in an underlying graph, can we reliably identify the rest of the community? We start from the ob...

1. Masting, the synchronized production of variable seed crops, is widespread among woody plants, but there is no consensus about the underlying proximate mechanisms. To understand this population-level behaviour, it is necessary to dissect the behaviour of individual trees as well as the interactions that synchronize them. 2. Here, we test a model of masting in which variability in seed set is...

Reproduction in rare plants may be influenced and limited by a complex combination of factors. External threats such as invasive species and landscape characteristics such as isolation may impinge on both pollination and seed predation dynamics, which in turn can strongly affect reproduction. I assessed how patterns in floral visitation, seed predation, invasive ant presence, and plant isolatio...

Pollinator-plant relationships are found to be particularly vulnerable to land use change. Yet despite extensive research in agricultural and natural systems, less attention has focused on these interactions in neighboring urban areas and its impact on pollination services. We investigated pollinator-plant interactions in a peri-urban landscape on the outskirts of the San Francisco Bay Area, Ca...

Doyle, J.A. and Donoghue, M.J., 1987. The importance of fossils in elucidating seed plant phylogeny and macroevolution. Rev. Palaeobot. Palynol., 50: 63--95. In order to gain insights on the controversial question of the value of fossils in understanding phylogeny and macroevolution, we used numerical parsimony methods to analyze a data set amassed for a cladistic study of living and fossil see...

MOTIVATION Pairing between the target sequence and the 6-8 nt long seed sequence of the miRNA presents the most important feature for miRNA target site prediction. Novel high-throughput technologies such as Argonaute HITS-CLIP afford meanwhile a detailed study of miRNA:mRNA duplices. These interaction maps enable a first discrimination between functional and non-functional target sites in a bul...