نتایج جستجو برای: mrna degradation

تعداد نتایج: 296776  

Journal: :Molecular cell 2013
Mai Sun Björn Schwalb Nicole Pirkl Kerstin C Maier Arne Schenk Henrik Failmezger Achim Tresch Patrick Cramer

The rates of mRNA synthesis and degradation determine cellular mRNA levels and can be monitored by comparative dynamic transcriptome analysis (cDTA) that uses nonperturbing metabolic RNA labeling. Here we present cDTA data for 46 yeast strains lacking genes involved in mRNA degradation and metabolism. In these strains, changes in mRNA degradation rates are generally compensated by changes in mR...

2010
Kuo-Ming Lee Ia-Wen Hsu Woan-Yuh Tarn

TRAP150 has been identified as a subunit of the transcription regulatory complex TRAP/Mediator, and also a component of the spliceosome. The exact function of TRAP150, however, remains unclear. We recently identified TRAP150 by its association with the mRNA export factor TAP. TRAP150 contains an arginine/serine-rich domain and has sequence similarity with the cell death-promoting transcriptiona...

2011
Mally Dori-Bachash Efrat Shema Itay Tirosh

mRNA levels are determined by the balance between transcription and mRNA degradation, and while transcription has been extensively studied, very little is known regarding the regulation of mRNA degradation and its coordination with transcription. Here we examine the evolution of mRNA degradation rates between two closely related yeast species. Surprisingly, we find that around half of the evolu...

2015
Huijuan Feng Xuegong Zhang Chaolin Zhang

The volume of RNA-Seq data sets in public repositories has been expanding exponentially, providing unprecedented opportunities to study gene expression regulation. Because degraded RNA samples, such as those collected from post-mortem tissues, can result in distinct expression profiles with potential biases, a particularly important step in mining these data is quality control. Here we develop ...

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