Molecular markers, in recent years, have accelerated plant breeding methods significantly with an objective of crop improvement. At present a variety of molecular markers are available and the choice of using a particular type of marker depends on the user. With the advances in the area of genomics, new type and gene-derived markers as well as novel approaches such as genetical genomics, linkag...

In this paper, we progressively de-center the Human Genome Project (HGP) in history of genomics and human genomics. We show that HGP, understood as an international effort to make reference genome sequence publicly available, constitutes a specific model genomics: prominent influential but nevertheless distinct from others preceded, existed alongside, succeeded it. Our analysis comprehensive co...

When the human genome project was conceived, its leaders wanted all researchers to have equal access to the data and associated research tools. Their vision of equal access provides an unprecedented teaching opportunity. Teachers and students have free access to the same databases that researchers are using. Furthermore, the recent movement to deliver scientific publications freely has presente...

conclusions the b3, b5, b7, b8 and b9 subgenotypes can be clustered into quasi-sub-genotype b3 and the open reading frame of hbv has a start codon preference; however, whether a mutation in the start codon in the pre-s2 region has an impact on survival and replication of hbv remains to be determined. background the number of cases of hbv infection reported by the who for each district and count...

The sequencing of the canine genome, combined with additional genomic technologies, has created opportunities for research linking veterinary genomics naturally occurring cancer in dogs. Also, as numerous cancers have features common human cancers, comparative studies can be performed to evaluate use dogs models cancer. There been several reviews but, best our knowledge, there no comprehensive ...

Researchers are increasingly depending on various centralized resources to access the vast amount of information reported in the literature and generated by systematic sequencing and functional genomics projects. Biological databases have become everyday working tools for many researchers. This dependency goes both ways in that the databases require continuous feedback from the research communi...

Databases and chemo- and bioinformatics tools that contain genomic, proteomic and functional information have become indispensable for antimicrobial drug research. The combination of chemoinformatics tools, bioinformatics tools and relational databases provides means of analyzing, linking and comparing online search results. The development of computational tools feeds on a diversity of discipl...

The identification of catalytic residues is an essential step in functional characterization of enzymes. We present a purely structural approach to this problem, which is motivated by the difficulty of evolution-based methods to annotate structural genomics targets that have few or no homologs in the databases. Our approach combines a state-of-the-art support vector machine (SVM) classifier wit...

UNLABELLED Genomic datasets are often interpreted in the context of large-scale reference databases. One approach is to identify significantly overlapping gene sets, which works well for gene-centric data. However, many types of high-throughput data are based on genomic regions. Locus Overlap Analysis (LOLA) provides easy and automatable enrichment analysis for genomic region sets, thus facilit...

Due to the rapid progress in genome analysis, complete genome sequences of many organisms become available. Now proteins are the next target for intensive study, as evidenced by the emerging fields such as structural genomics and proteome analysis. In order to elucidate molecular function of proteins, we need to have knowledge of their amino acid sequence and structure. The sequence and structu...