نتایج جستجو برای: exome sequencing

تعداد نتایج: 127939  

2014
Ga Won Jeon Mi-Na Lee Ji Mi Jung Seong Yeon Hong Young Nam Kim Jong Beom Sin Chang-Seok Ki

BACKGROUND Atelosteogenesis type I (AO-I) is a rare lethal skeletal dysplastic disorder characterized by severe short-limbed dwarfism and dislocated hips, knees, and elbows. AO-I is caused by mutations in the filamin B (FLNB) gene; however, several other genes can cause AO-like lethal skeletal dysplasias. METHODS In order to screen all possible genes associated with AO-like lethal skeletal dy...

Journal: :Statistical applications in genetics and molecular biology 2011
Michael I Love Alena Myšičková Ruping Sun Vera Kalscheuer Martin Vingron Stefan A Haas

Varying depth of high-throughput sequencing reads along a chromosome makes it possible to observe copy number variants (CNVs) in a sample relative to a reference. In exome and other targeted sequencing projects, technical factors increase variation in read depth while reducing the number of observed locations, adding difficulty to the problem of identifying CNVs. We present a hidden Markov mode...

2014
Bart J. G. Broeckx Frank Coopman Geert E. C. Verhoeven Valérie Bavegems Sarah De Keulenaer Ellen De Meester Filip Van Niewerburgh Dieter Deforce

Whole exome sequencing is a technique that aims to selectively sequence all exons of protein-coding genes. A canine whole exome sequencing enrichment kit was designed based on the latest canine reference genome (build 3.1.72). Its performance was tested by sequencing 2 exome captures, each consisting of 4 pre-capture pooled, barcoded Illumina libraries on an Illumina HiSeq 2500. At an average s...

2013
Muhammad Ajmal Muhammad Imran Khan Kornelia Neveling Ali Tayyab Sulman Jaffar Ahmed Sadeque Humaira Ayub Nasir Mahmood Abbasi Moeen Riaz Shazia Micheal Christian Gilissen Syeda Hafiza Benish Ali Maleeha Azam Rob W. J. Collin Frans P. M. Cremers Raheel Qamar

PURPOSE To determine the genetic cause of Bardet-Biedl syndrome (BBS) in two consanguineous Pakistani families. METHODS Clinical characterization of the affected individuals in both families was performed with ophthalmic examination, electroretinography, electrocardiography, and liver and renal profiling. Seventeen genes are known to be associated with BBS, so exome sequencing was preferred o...

2013
Jonatan Halvardson Ammar Zaghlool Lars Feuk

RNA sequencing has become an important method to perform hypothesis-free characterization of global gene expression. One of the limitations of RNA sequencing is that most sequence reads represent highly expressed transcripts, whereas low level transcripts are challenging to detect. To combine the benefits of traditional expression arrays with the advantages of RNA sequencing, we have used whole...

2015
Laura M Amendola Denise Lautenbach Sarah Scollon Barbara Bernhardt Sawona Biswas Kelly East Jessica Everett Marian J Gilmore Patricia Himes Victoria M Raymond Julia Wynn Ragan Hart Gail P Jarvik

Whole genome and exome sequencing tests are increasingly being ordered in clinical practice, creating a need for research exploring the return of results from these tests. A goal of the Clinical Sequencing and Exploratory Research (CSER) consortium is to gain experience with this process to develop best practice recommendations for offering exome and genome testing and returning results. Geneti...

2014
Guangxin Li Jian Yu Kun Wang Bin Wang Minghai Wang Shuguang Zhang Shiyong Qin Zhenhai Yu

UNLABELLED Marfan syndrome is a common autosomal dominant hereditary connective tissue disorder. There is no cure for Marfan syndrome currently. Next-generation sequencing (NGS) technology is efficient to identify genetic lesions at the exome level. Here we carried out exome sequencing of two Marfan syndrome patients. Further Sanger sequencing validation in other five members from the same fami...

Journal: :Discovery medicine 2011
Gholson J Lyon Tao Jiang Richard Van Wijk Wei Wang Paul Mark Bodily Jinchuan Xing Lifeng Tian Reid J Robison Mark Clement Yang Lin Peng Zhang Ying Liu Barry Moore Joseph T Glessner Josephine Elia Fred Reimherr Wouter W van Solinge Mark Yandell Hakon Hakonarson Jun Wang William Evan Johnson Zhi Wei Kai Wang

Exome sequencing has identified the causes of several Mendelian diseases, although it has rarely been used in a clinical setting to diagnose the genetic cause of an idiopathic disorder in a single patient. We performed exome sequencing on a pedigree with several members affected with attention deficit/hyperactivity disorder (ADHD), in an effort to identify candidate variants predisposing to thi...

Journal: :American journal of human genetics 2018
Sarah Ratzel Sara B Cullinan

Auer et al., page 794 Exome sequencing in small cohorts has been successfully employed for the discovery of rare, highly penetrant mutations in familial diseases. However, the use of exome sequencing for identifying low-frequency variants in large populations has been confounded by technical limitations and prohibitive costs. To apply low-frequency variants captured by exome sequencing to a lar...

Journal: :Arthritis & rheumatology 2014
Julia I Ellyard Rebekka Jerjen Jaime L Martin Adrian Y S Lee Matthew A Field Simon H Jiang Jean Cappello Svenja K Naumann T Daniel Andrews Hamish S Scott Marco G Casarotto Christopher C Goodnow Jeffrey Chaitow Virginia Pascual Paul Hertzog Stephen I Alexander Matthew C Cook Carola G Vinuesa

Objective. Systemic lupus erythematosus (SLE) isa chronic and heterogeneous autoimmune disease. Both twin and sibling studies indicate a strong genetic contribution to lupus, but in the majority of cases the pathogenic variant remains to be identified. The genetic contribution to disease is likely to be greatest in cases with early onset and severe phenotypes. Whole-exome sequencing now offers ...

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