نتایج جستجو برای: نشانگر est ssr

تعداد نتایج: 41992  

2016
Marina Arias Monica Hernandez Naroa Remondegui Koen Huvenaars Peter van Dijk Enrique Ritter

Taraxacum koksaghyz Rodin (TKS) has been studied in many occasions as a possible alternative source for natural rubber production of good quality and for inulin production. Some tire companies are already testing TKS tire prototypes. There are also many investigations on the production of bio-fuels from inulin and inulin applications for health improvement and in the food industry. A limited am...

Journal: :Genetics and molecular research : GMR 2016
T Mornkham P P Wangsomnuk X C Mo F O Francisco L Z Gao H Kurzweil

Jerusalem artichoke (Helianthus tuberosus L.) is a perennial tuberous plant and a traditional inulin-rich crop in Thailand. It has become the most important source of inulin and has great potential for use in chemical and food industries. In this study, expressed sequence tag (EST)-based simple sequence repeat (SSR) markers were developed from 40,362 Jerusalem artichoke ESTs retrieved from the ...

Journal: :Sustainability 2023

Kenaf is an important bast fiber crop. In order to diversify the available kenaf simple sequence repeat (SSR) molecular markers and generate potentially useful for breeding, we developed expression tag (EST-SSR) based on lead-stressed transcriptome sequencing data spliced unigene sequences. Additionally, distribution of SSRs in potential functions SSR-containing genes were determined. Moreover,...

2012
Jagajjit Sahu Ranjan Sarmah Budheswar Dehury Kishore Sarma Smita Sahoo Mousumi Sahu Madhumita Barooah Mahendra Kumar Modi Priyabrata Sen

Simple Sequence Repeats (SSRs) developed from Expressed Sequence Tags (ESTs), known as EST-SSRs are most widely used and potentially valuable source of gene based markers for their high levels of crosstaxon portability, rapid and less expensive development. The EST sequence information in the publicly available databases is increasing in a faster rate. The emerging computational approach provid...

ژورنال: :فصلنامه علمی ـ پژوهشی زیست فناوری گیاهان زراعی 2015
محمد علی ابراهیمی مطهره میر مهرشاد زین العابدینی علی ایمانی

کلکسیون هسته مجموعه ای از نمونه های گزینش شده است که معرف تنوع ژنتیکی موجود در کلکسیون پایه می باشد. این استراتژی به منظور به حداقل رساندن هزینه حفاظت از ذخائر ژنتیکی با حفظ حداکثری تنوع ژنتیکی معرفی شده است. در این روش امکان ارزیابی سریع ژرم پلاسم و دسترسی آسانتر به کلکسیون پایه فراهم می شود. در این تحقیق، به منظور ارزیابی تنوع ژنتیکی و تشکیل کلکسیون هسته، 139 نمونه prunus dulcismill. با منشأ ...

2013
Guwen Zhang Shengchun Xu Weihua Mao Yaming Gong Qizan Hu

The development of expressed sequence tags (ESTs) has provided a useful source for the mining of simple sequence repeat (SSR) markers. The hyacinth bean (Lablab purpureus L.) is one of the most ancient and important legume crops in the world, and is widely distributed in tropical and sub-tropical regions, but currently only limited molecular markers are available. The aim of the present study i...

2011
Martín García Pamela Villalba Cintia Acuña Javier Oberschelp Leonel Harrand Mauro Surenciski María Martínez César Petroli Carolina Sansaloni Danielle Faria Dario Grattapaglia Susana Marcucci Poltri

Background Eucalypts are the most widely planted hardwood trees in the world, occupying globally more than 18 million hectares, as an important source of carbon neutral renewable energy and raw material for pulp, paper and solid wood. Intensive planting programs of Eucalyptus grandis have been carried out in the Argentinian Mesopotamia. Linkage maps are useful tools for quantitative trait loci ...

2011
Mohammad Reza Bakhtiarizadeh Mansour Ebrahimi Esmaeil Ebrahimie

Tandem repeats are found in both coding and non-coding sequences of higher organisms. These sequences can be used in cancer genetics and diagnosis to unravel the genetic basis of tumor formation and progression. In this study, a possible relationship between SSR distributions and lung cancer was studied by comparative analysis of EST-SSRs in normal and lung cancerous tissues. While the EST-SSR ...

Journal: :The Journal of heredity 2011
Dilpreet S Riar Sachin Rustgi Ian C Burke Kulvinder S Gill Joseph P Yenish

Prickly lettuce (Lactuca serriola L.) is a problematic weed of Pacific Northwest and recently developed resistance to the auxinic herbicide 2,4-D. There are no publically available simple sequence repeat (SSR) markers to tag 2,4-D resistance genes in L. serriola. Therefore, a study was conducted to develop SSR markers from expressed sequence tags (ESTs) of 5 Lactuca species. A total of 15,970 S...

2013
Sachiko N. Isobe Hideki Hirakawa Shusei Sato Fumi Maeda Masami Ishikawa Toshiki Mori Yuko Yamamoto Kenta Shirasawa Mitsuhiro Kimura Masanobu Fukami Fujio Hashizume Tomoko Tsuji Shigemi Sasamoto Midori Kato Keiko Nanri Hisano Tsuruoka Chiharu Minami Chika Takahashi Tsuyuko Wada Akiko Ono Kumiko Kawashima Naomi Nakazaki Yoshie Kishida Mitsuyo Kohara Shinobu Nakayama Manabu Yamada Tsunakazu Fujishiro Akiko Watanabe Satoshi Tabata

The cultivated strawberry (Fragaria × ananassa) is an octoploid (2n = 8x = 56) of the Rosaceae family whose genomic architecture is still controversial. Several recent studies support the AAA'A'BBB'B' model, but its complexity has hindered genetic and genomic analysis of this important crop. To overcome this difficulty and to assist genome-wide analysis of F. × ananassa, we constructed an integ...

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