نتایج جستجو برای: sphingomonas paucimobilis

تعداد نتایج: 1153  

Journal: :International journal of systematic and evolutionary microbiology 2004
Ying Li Yoshiaki Kawamura Nagatoshi Fujiwara Takashi Naka Hongsheng Liu Xinxiang Huang Kazuo Kobayashi Takayuki Ezaki

On the basis of phenotypic and genotypic characteristics and 16S rRNA gene sequence analysis, novel species belonging to the genera Sphingomonas and Brevundimonas were identified from samples taken from the Russian space laboratory Mir. Strain A1-18(T) was isolated from the air. 16S rDNA sequence analysis showed that strain A1-18(T) formed a coherent cluster with Sphingomonas sanguinis, Sphingo...

2014
Mei-Ling Sharon TAI Rukumani Devi VELAYUTHAN

Sphingomonas paucimobilis is an aerobic gram-negative bacillus. The bacteria can cause infections, which can be devastating and, therefore, the patients need adequate and early antibiotic cover. We are presenting an interesting case of meningitis secondary to an unusual S. paucimobilis infection. This is the second case to our knowledge in the literature on meningitis due to S. paucimobilis. Th...

Journal: :Applied and environmental microbiology 1995
J K Fredrickson D L Balkwill G R Drake M F Romine D B Ringelberg D C White

An obligately aerobic chemoheterotrophic bacterium (strain F199) previously isolated from Southeast Coastal Plain subsurface sediments and shown to degrade toluene, naphthalene, and other aromatic compounds (J. K. Fredrickson, F. J. Brockman, D. J. Workman, S. W. Li, and T. O. Stevens, Appl. Environ. Microbiol. 57:796-803, 1991) was characterized by analysis of its 16S rRNA nucleotide base sequ...

Journal: :Journal of bacteriology 2003
Hirofumi Hara Eiji Masai Keisuke Miyauchi Yoshihiro Katayama Masao Fukuda

The protocatechuate (PCA) 4,5-cleavage pathway is the essential metabolic route for degradation of low-molecular-weight products derived from lignin by Sphingomonas paucimobilis SYK-6. In the 10.5-kb EcoRI fragment carrying the genes for PCA 4,5-dioxygenase (ligAB), 2-pyrone-4,6-dicarboxylate hydrolase (ligI), 4-oxalomesaconate hydratase (ligJ), and a part of 4-carboxy-2-hydroxymuconate-6-semia...

2017
Ewelina Mnich Ruben Vanholme Paula Oyarce Sarah Liu Fachuang Lu Geert Goeminne Bodil Jørgensen Mohammed S. Motawie Wout Boerjan John Ralph Peter Ulvskov Birger L. Møller Nanna Bjarnholt Jesper Harholt

Lignin is a major polymer in the secondary plant cell wall and composed of hydrophobic interlinked hydroxyphenylpropanoid units. The presence of lignin hampers conversion of plant biomass into biofuels; plants with modified lignin are therefore being investigated for increased digestibility. The bacterium Sphingomonas paucimobilis produces lignin-degrading enzymes including LigD, LigF and LigG ...

Journal: :The Journal of biological chemistry 2003
Radka Chaloupková Jana Sýkorová Zbynek Prokop Andrea Jesenská Marta Monincová Martina Pavlová Masataka Tsuda Yuji Nagata Jirí Damborský

Structural comparison of three different haloalkane dehalogenases suggested that substrate specificity of these bacterial enzymes could be significantly influenced by the size and shape of their entrance tunnels. The surface residue leucine 177 positioned at the tunnel opening of the haloalkane dehalogenase from Sphingomonas paucimobilis UT26 was selected for modification based on structural an...

Journal: :Biochemistry 2002
Aaron J Oakley Zbynek Prokop Michal Bohác Jan Kmunícek Tomás Jedlicka Marta Monincová Ivana Kutá-Smatanová Yuji Nagata Jirí Damborský Matthew C J Wilce

The hydrolysis of haloalkanes to their corresponding alcohols and inorganic halides is catalyzed by alpha/beta-hydrolases called haloalkane dehalogenases. The study of haloalkane dehalogenases is vital for the development of these enzymes if they are to be utilized for bioremediation of organohalide-contaminated industrial waste. We report the kinetic and structural analysis of the haloalkane d...

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