Waveguide terahertz time-domain spectroscopy (THz-TDS) is used to characterize the temperature dependent vibrational properties of three threat-related materials: 4-amino-dinitrotoluene (4A-DNT), pentaerythritol tetranitrate (PETN), and octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine (HMX). These materials are characterized as thin polycrystalline layers deposited in the 50 micron gap of a met...