نتایج جستجو برای: oligonucleotide array sequence analysis

تعداد نتایج: 3216786  

Journal: :Genome research 2008
David S Johnson Wei Li D Benjamin Gordon Arindam Bhattacharjee Bo Curry Jayati Ghosh Leonardo Brizuela Jason S Carroll Myles Brown Paul Flicek Christoph M Koch Ian Dunham Mark Bieda Xiaoqin Xu Peggy J Farnham Philipp Kapranov David A Nix Thomas R Gingeras Xinmin Zhang Heather Holster Nan Jiang Roland D Green Jun S Song Scott A McCuine Elizabeth Anton Loan Nguyen Nathan D Trinklein Zhen Ye Keith Ching David Hawkins Bing Ren Peter C Scacheri Joel Rozowsky Alexander Karpikov Ghia Euskirchen Sherman Weissman Mark Gerstein Michael Snyder Annie Yang Zarmik Moqtaderi Heather Hirsch Hennady P Shulha Yutao Fu Zhiping Weng Kevin Struhl Richard M Myers Jason D Lieb X Shirley Liu

The most widely used method for detecting genome-wide protein-DNA interactions is chromatin immunoprecipitation on tiling microarrays, commonly known as ChIP-chip. Here, we conducted the first objective analysis of tiling array platforms, amplification procedures, and signal detection algorithms in a simulated ChIP-chip experiment. Mixtures of human genomic DNA and "spike-ins" comprised of near...

Journal: :Analytical science advances 2021

Chromatographic analysis of therapeutic oligonucleotides is challenging due to the presence closely related impurities, degradants or metabolites and phosphorothioate bonds, which introduce chiral centers. In present study, ion pair reversed phase chromatography on micropillar array columns was investigated. Two commonly used mobile conditions were included. With 16.3 mM triethylamine 400 hexaf...

Journal: :Nucleic acids research 1977
E Y Chen B A Roe

Two dimensional PEI-cellulose thin layer chromatography can resolve sequentially degraded oligonucleotide fragments of tRNA. This technique entails the sequential degradation of the oligonucleotide with snake venom phosphodiesterase in the presence of bacterial alkaline phosphatase, and periodate oxidation followed by tritiated sodium borohydride reduction of the 3' terminal nucleoside. Subsequ...

2014
Tim J. Dumonceaux Margaret Green Christine Hammond Edel Perez Chrystel Olivier

Phytoplasmas ('Candidatus Phytoplasma' spp.) are insect-vectored bacteria that infect a wide variety of plants, including many agriculturally important species. The infections can cause devastating yield losses by inducing morphological changes that dramatically alter inflorescence development. Detection of phytoplasma infection typically utilizes sequences located within the 16S-23S rRNA-encod...

Journal: :Journal of visualized experiments : JoVE 2009
Katherine H Watkins Allan Stewart William Fairbrother

Sequencing RNAs that co-immunoprecipitate (co-IP) with RNA binding proteins has increased our understanding of splicing by demonstrating that binding location often influences function of a splicing factor. However, as with any sampling strategy the chance of identifying an RNA bound to a splicing factor is proportional to its cellular abundance. We have developed a novel in vitro approach for ...

نمودار تعداد نتایج جستجو در هر سال

با کلیک روی نمودار نتایج را به سال انتشار فیلتر کنید