نتایج جستجو برای: ngs

تعداد نتایج: 5131  

2015
Michele Simbolo Andrea Mafficini Marco Agostini Corrado Pedrazzani Chiara Bedin Emanuele D. Urso Donato Nitti Giona Turri Maria Scardoni Matteo Fassan Aldo Scarpa

BACKGROUND Genetic screening in families with high risk to develop colorectal cancer (CRC) prevents incurable disease and permits personalized therapeutic and follow-up strategies. The advancement of next-generation sequencing (NGS) technologies has revolutionized the throughput of DNA sequencing. METHODS A series of 16 probands for either familial adenomatous polyposis (FAP; 8 cases) or here...

Journal: :Bioinformatics 2016
Jie Ren Kai Song Minghua Deng Gesine Reinert Charles H. Cannon Fengzhu Sun

MOTIVATION Next-generation sequencing (NGS) technologies generate large amounts of short read data for many different organisms. The fact that NGS reads are generally short makes it challenging to assemble the reads and reconstruct the original genome sequence. For clustering genomes using such NGS data, word-count based alignment-free sequence comparison is a promising approach, but for this a...

2013
Sam Behjati Patrick S Tarpey

Next generation sequencing (NGS), massively parallel or deep sequencing are related terms that describe a DNA sequencing technology which has revolutionised genomic research. Using NGS an entire human genome can be sequenced within a single day. In contrast, the previous Sanger sequencing technology, used to decipher the human genome, required over a decade to deliver the final draft. Although ...

2018
Francesca L. Nice Charlie E. Massie Thorsten Klampfl Anthony R. Green

Current next-generation sequencing (NGS) technologies allow unprecedented insights into the mutational profiles of tumors. Recent studies in myeloproliferative neoplasms have further demonstrated that, not only the mutational profile, but also the order in which these mutations are acquired is relevant for our understanding of the disease. Our ability to assign mutation order from NGS data alon...

2017
Jinyu Wang Weibo Zhao Haixiao Chen An Qin Peizhi Zhu

Self-assembly nanogels (NGs) were formed by bioconjugating methotrexate (MTX) with chondroitin sulfate (CS). MTX-CS NGs can greatly enhance the solubility and improve the delivery efficacy of MTX due to the CD44 binding property of CS. Vivo experiments revealed that MTX-CS NGs showed less toxicity than MTX. MTX-CS NGs can improve the anti-tumor effect while reducing the side effects of MTX. Due...

2016
Pita Sudrajad Aditi Sharma Chang Gwon Dang Jong Joo Kim Kwan Suk Kim Jun Heon Lee Sidong Kim Seung Hwan Lee

Four carcass traits, namely carcass weight (CW), eye muscle area (EMA), back fat thickness (BF), and marbling score (MS), are the main price decision parameters used for purchasing Hanwoo beef. The development of DNA markers for these carcass traits for use in a beef management system could result in substantial profit for beef producers in Korea. The objective of this study was to validate the...

2016
Lea Landolt Philipp Strauss Hans-Peter Marti Øystein Eikrem

The emergence of next generation sequencing (NGS) techniques has made the sequencing of whole genomes, transcriptomes, and epigenomes faster and more readily available than previous methods such as Sanger sequencing, which was developed in the 1970s. It is now 10 years since NGS began to revolutionise biological and medical research. Sequencing of RNA provides insights into up or downregulated ...

2016
Emma Thomson Camilla L C Ip Anjna Badhan Mette T Christiansen Walt Adamson M Azim Ansari David Bibby Judith Breuer Anthony Brown Rory Bowden Josie Bryant David Bonsall Ana Da Silva Filipe Chris Hinds Emma Hudson Paul Klenerman Kieren Lythgow Jean L Mbisa John McLauchlan Richard Myers Paolo Piazza Sunando Roy Amy Trebes Vattipally B Sreenu Jeroen Witteveldt Eleanor Barnes Peter Simmonds

Affordable next-generation sequencing (NGS) technologies for hepatitis C virus (HCV) may potentially identify both viral genotype and resistance genetic motifs in the era of directly acting antiviral (DAA) therapies. This study compared the ability of high-throughput NGS methods to generate full-length, deep, HCV sequence data sets and evaluated their utility for diagnostics and clinical assess...

2016
Michael J. Pishvaian R. Joseph Bender Lynn M. Matrisian Lola Rahib Andrew Hendifar William A. Hoos Sam Mikhail Vincent Chung Vincent Picozzi Craig Heartwell Kimberly Mason Katelyn Varieur Metasebia Aberra Subha Madhavan Emanuel Petricoin Jonathan R. Brody

Recent improvements in next-generation sequencing (NGS) technology have enabled detection of biomarkers in cell-free DNA in blood and may ultimately replace invasive tissue biopsies. However, a better understanding of the performance of blood-based NGS assays is needed prior to routine clinical use. As part of an IRB-approved molecular profiling registry trial of pancreatic ductal adenocarcinom...

2012
Francesco Angeloni Niels Wagemaker Philippine Vergeer Joop Ouborg

Conservation genetics is expanding its research horizon with a genomic approach, by incorporating the modern techniques of next-generation sequencing (NGS). Application of NGS overcomes many limitations of conservation genetics. First, NGS allows for genome-wide screening of markers, which may lead to a more representative estimation of genetic variation within and between populations. Second, ...

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