نتایج جستجو برای: large genomic rearrangements

تعداد نتایج: 1142013  

Journal: :Genome research 2003
Pavel Pevzner Glenn Tesler

Although analysis of genome rearrangements was pioneered by Dobzhansky and Sturtevant 65 years ago, we still know very little about the rearrangement events that produced the existing varieties of genomic architectures. The genomic sequences of human and mouse provide evidence for a larger number of rearrangements than previously thought and shed some light on previously unknown features of mam...

In the present study two genetically connected small and large populations were simulated and the effect of different sources of information from foreign populations on the accuracy of predicted genomic breeding values of young animals of the small population was investigated. A large population consist of 200000 animals over 15 generations and a small population consist of 5000 animals over 3 ...

2011
Philip J. Stephens Chris D. Greenman Beiyuan Fu Fengtang Yang Graham R. Bignell Laura J. Mudie Erin D. Pleasance King Wai Lau David Beare Lucy A. Stebbings Stuart McLaren Meng-Lay Lin David J. McBride Ignacio Varela Serena Nik-Zainal Catherine Leroy Mingming Jia Andrew Menzies Adam P. Butler Jon W. Teague Michael A. Quail John Burton Harold Swerdlow Nigel P. Carter Laura A. Morsberger Christine Iacobuzio-Donahue George A. Follows Anthony R. Green Adrienne M. Flanagan Michael R. Stratton P. Andrew Futreal Peter J. Campbell

Cancer is driven by somatically acquired point mutations and chromosomal rearrangements, conventionally thought to accumulate gradually over time. Using next-generation sequencing, we characterize a phenomenon, which we term chromothripsis, whereby tens to hundreds of genomic rearrangements occur in a one-off cellular crisis. Rearrangements involving one or a few chromosomes crisscross back and...

Journal: :Journal of the American Society of Nephrology : JASN 2011
Rosa Vargas-Poussou Karin Dahan Diana Kahila Annabelle Venisse Eva Riveira-Munoz Huguette Debaix Bernard Grisart Franck Bridoux Robert Unwin Bruno Moulin Jean-Philippe Haymann Marie-Christine Vantyghem Claire Rigothier Bertrand Dussol Michel Godin Hubert Nivet Laurence Dubourg Ivan Tack Anne-Paule Gimenez-Roqueplo Pascal Houillier Anne Blanchard Olivier Devuyst Xavier Jeunemaitre

Gitelman's syndrome (GS) is a rare, autosomal recessive, salt-losing tubulopathy caused by mutations in the SLC12A3 gene, which encodes the thiazide-sensitive NaCl cotransporter (NCC). Because 18 to 40% of suspected GS patients carry only one SLC12A3 mutant allele, large genomic rearrangements may account for unidentified mutations. Here, we directly sequenced genomic DNA from a large cohort of...

Journal: :BMC Medical Genomics 2021

Abstract Background Emerging studies suggest that low?coverage massively parallel copy number variation sequencing (CNV-seq) more sensitive than chromosomal microarray analysis (CMA) for detecting low-level mosaicism. However, a retrospective back-to-back comparison evaluating accuracy, efficacy, and incremental yield of CNV-seq compared with CMA is warranted. Methods A total 72 mosaicism cases...

Journal: :Molecular biology and evolution 2000
S Bensch A Härlid

The organization of the mitochondrial genome is generally very conserved among vertebrates. Because of this, examination of the rare rearrangements which do occur has been suggested as offering a powerful alternative to phylogenetic analyses of mitochondrial DNA sequences. Here, we report on an avian mitochondrial rearrangement in a group of oscine passerines (warblers of the genus Phylloscopus...

2017
Marcella Nunziato Flavio Starnone Barbara Lombardo Matilde Pensabene Caterina Condello Francesco Verdesca Chiara Carlomagno Sabino De Placido Lucio Pastore Francesco Salvatore Valeria D'Argenio

The aim of this study was to verify the reliability of a next generation sequencing (NGS)-based method as a strategy to detect all possible BRCA mutations, including large genomic rearrangements. Genomic DNA was obtained from a peripheral blood sample provided by a patient from Southern Italy with early onset breast cancer and a family history of diverse cancers. BRCA molecular analysis was per...

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