نتایج جستجو برای: exome

تعداد نتایج: 8594  

Journal: :Arthritis & rheumatology 2014
Julia I Ellyard Rebekka Jerjen Jaime L Martin Adrian Y S Lee Matthew A Field Simon H Jiang Jean Cappello Svenja K Naumann T Daniel Andrews Hamish S Scott Marco G Casarotto Christopher C Goodnow Jeffrey Chaitow Virginia Pascual Paul Hertzog Stephen I Alexander Matthew C Cook Carola G Vinuesa

Objective. Systemic lupus erythematosus (SLE) isa chronic and heterogeneous autoimmune disease. Both twin and sibling studies indicate a strong genetic contribution to lupus, but in the majority of cases the pathogenic variant remains to be identified. The genetic contribution to disease is likely to be greatest in cases with early onset and severe phenotypes. Whole-exome sequencing now offers ...

Journal: :Circulation. Cardiovascular genetics 2015
Nathan O Stitziel Gina M Peloso Marianne Abifadel Angelo B Cefalu Sigrid Fouchier M Mahdi Motazacker Hayato Tada Daniel B Larach Zuhier Awan Jorge F Haller Clive R Pullinger Mathilde Varret Jean-Pierre Rabès Davide Noto Patrizia Tarugi Masa-Aki Kawashiri Atsushi Nohara Masakazu Yamagishi Marjorie Risman Rahul Deo Isabelle Ruel Jay Shendure Deborah A Nickerson James G Wilson Stephen S Rich Namrata Gupta Deborah N Farlow Benjamin M Neale Mark J Daly John P Kane Mason W Freeman Jacques Genest Daniel J Rader Hiroshi Mabuchi John J P Kastelein G Kees Hovingh Maurizio R Averna Stacey Gabriel Catherine Boileau Sekar Kathiresan

BACKGROUND Exome sequencing is a promising tool for gene mapping in Mendelian disorders. We used this technique in an attempt to identify novel genes underlying monogenic dyslipidemias. METHODS AND RESULTS We performed exome sequencing on 213 selected family members from 41 kindreds with suspected Mendelian inheritance of extreme levels of low-density lipoprotein cholesterol (after candidate ...

2017
Lídia Feliubadaló Raúl Tonda Mireia Gausachs Jean-Rémi Trotta Elisabeth Castellanos Adriana López-Doriga Àlex Teulé Eva Tornero Jesús del Valle Bernat Gel Marta Gut Marta Pineda Sara González Mireia Menéndez Matilde Navarro Gabriel Capellá Ivo Gut Eduard Serra Joan Brunet Sergi Beltran Conxi Lázaro

Next generation sequencing panels have been developed for hereditary cancer, although there is some debate about their cost-effectiveness compared to exome sequencing. The performance of two panels is compared to exome sequencing. Twenty-four patients were selected: ten with identified mutations (control set) and fourteen suspicious of hereditary cancer but with no mutation (discovery set). Tru...

2017
Yoshiji Yamada Jun Sakuma Ichiro Takeuchi Yoshiki Yasukochi Kimihiko Kato Mitsutoshi Oguri Tetsuo Fujimaki Hideki Horibe Masaaki Muramatsu Motoji Sawabe Yoshinori Fujiwara Yu Taniguchi Shuichi Obuchi Hisashi Kawai Shoji Shinkai Seijiro Mori Tomio Arai Masashi Tanaka

We have performed exome-wide association studies to identify genetic variants that influence body mass index or confer susceptibility to obesity or metabolic syndrome in Japanese. The exome-wide association study for body mass index included 12,890 subjects, and those for obesity and metabolic syndrome included 12,968 subjects (3954 individuals with obesity, 9014 controls) and 6817 subjects (39...

2015
Christian Magnus Page Sergio E. Baranzini Bjørn-Helge Mevik Steffan Daniel Bos Hanne F. Harbo Bettina Kulle Andreassen Joseph Devaney

Genotyping chips for rare and low-frequent variants have recently gained popularity with the introduction of exome chips, but the utility of these chips remains unclear. These chips were designed using exome sequencing data from mainly American-European individuals, enriched for a narrow set of common diseases. In addition, it is well-known that the statistical power of detecting associations w...

2016
Katarzyna Klonowska Luiza Handschuh Aleksandra Swiercz Marek Figlerowicz Piotr Kozlowski

Although currently available strategies for the preparation of exome-enriched libraries are well established, a final validation of the libraries in terms of exome enrichment efficiency prior to the sequencing step is of considerable importance. Here, we present a strategy for the evaluation of exome enrichment, i.e., the Multipoint Test for Targeted-enrichment Efficiency (MTTE), PCR-based appr...

2014
Evangelos Bellos Lachlan James M. Coin

MOTIVATION Exome sequencing technologies have transformed the field of Mendelian genetics and allowed for efficient detection of genomic variants in protein-coding regions. The target enrichment process that is intrinsic to exome sequencing is inherently imperfect, generating large amounts of unintended off-target sequence. Off-target data are characterized by very low and highly heterogeneous ...

Journal: :Clinical chemistry and laboratory medicine 2011
Emily M Coonrod Rebecca L Margraf Karl V Voelkerding

In the relatively short time frame since the introduction of next generation sequencing, it has become a method of choice for complex genomic research studies. As a paradigm shifting technology, we are now witnessing its translation into clinical diagnostic laboratories for patient care. Multi-gene panels for a variety of disorders are now available in several clinical laboratories based on tar...

2017
Yoshiji Yamada Jun Sakuma Ichiro Takeuchi Yoshiki Yasukochi Kimihiko Kato Mitsutoshi Oguri Tetsuo Fujimaki Hideki Horibe Masaaki Muramatsu Motoji Sawabe Yoshinori Fujiwara Yu Taniguchi Shuichi Obuchi Hisashi Kawai Shoji Shinkai Seijiro Mori Tomio Arai Masashi Tanaka

We performed exome-wide association studies to identify genetic variants-in particular, low-frequency variants with a large effect size-that confer susceptibility to coronary artery disease or myocardial infarction in Japanese. The exome-wide association studies were performed with 12,698 individuals (3488 subjects with coronary artery disease including 2438 with myocardial infarction, 9210 con...

2016
Elizabeth A. Sellars Bonnie R. Sullivan G. Bradley Schaefer

Rubinstein-Taybi syndrome is associated with intellectual and physical features. CREBBP and EP300 are causative. Few cases of EP300 mutations are reported. We report a case with mild features of RSTS and EP300 mutation on exome sequencing. This illustrates the utility of exome sequencing to expand every genetic phenotype.

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