نتایج جستجو برای: sequence tagged microsatellite sites stms
تعداد نتایج: 688540 فیلتر نتایج به سال:
We have constructed a physical map of the human genome by using a panel of 83 whole genome radiation hybrids (the Stanford G3 panel) in conjunction with 10,478 sequence-tagged sites (STSs) derived from random genomic DNA sequences, previously mapped genetic markers, and expressed sequences. Of these STSs, 5049 are framework markers that fall into 1766 high-confidence bins. An additional 945 STS...
We have constructed a radiation hybrid (RH) map of chicken chromosome (GGA) 15. This map can be used as a resource to efficiently map genes to this chromosome. The map has been developed using a 6000 rad chicken-hamster whole-genome radiation hybrid panel (ChickRH6). In total, six microsatellite loci, 18 sequence tagged sites (STSs) from BAC end sequences and 11 genes were typed on the panel. T...
A novel scheme (transformation of partial transmit sequences, T-PTS) is proposed for the partial transmit sequence (PTS) method to reduce peak-to-average power ratio of OFDM signals. In T-PTS certain transformations are applied on partial transmit sequences to generate more candidates for increasing performance. Simulations show that T-PTS outperforms conventional PTS for the same number of sub...
Citation: Portis E, Lanteri S, Barchi L, Portis F, Valente L, Toppino L, Rotino GL and Acquadro A (2018) Comprehensive Characterization of Simple Sequence Repeats in Eggplant (Solanum melongena L.) Genome and Construction of a Web Resource. Front. Plant Sci. 9:401. doi: 10.3389/fpls.2018.00401 Comprehensive Characterization of Simple Sequence Repeats in Eggplant (Solanum melongena L.) Genome an...
Draba ladina (Brassicaceae) is a small alpine flower endemic to the Swiss Alps. It occurs exclusively at elevations between 2600 and 3000 m and is restricted to less than a dozen mountains in the Lower Engadin. Morphological characters and polyploidy suggest a hybrid origin. Potential diploid progenitor species are distributed widely and often occur sympatrically. To study the evolutionary hist...
The natural transmission of microdeletions of the Y chromosome is occasionally reported in the literature. Here we describe the natural transmission of a partial AZFb deletion over three generations. PCR amplification of several sequence tagged site markers in the three AZF regions of the Y chromosome was carried out in a patient with oligoasthenoteratozoospermia, his father and his naturally c...
Simple sequence repeats (SSRs) in DNA sequences are composed of tandem iterations of short oligonucleotides and may have functional and/or structural properties that distinguish them from general DNA sequences. They are variable in length because of slip-strand mutations and may also affect local structure of the DNA molecule or the encoded proteins. Long SSRs (LSSRs) are common in eukaryotes b...
To date, despite the increasing number of genomic tools, there is no repository of ordered human BAC clones that covers entire chromosomes. This project presents a resource of mapped large DNA fragments that span eight human chromosomes at approximately 1-Mb resolution. These DNA fragments are bacterial artificial chromosome (BAC) clones anchored to sequence tagged site (STS) markers. This clon...
Establishing the pattern in peak heights within local sequence contexts improves the accuracy of base calling and the identification of DNA sequence variations in dye-terminator cycle sequencing. We have systematically examined pairs of sequence-tagged sites (STSs) that vary at only a single nucleotide to determine how base changes influence the peak heights of neighboring bases in sequencing t...
In this study, we determined species-specific variations by analyzing the mitochondrial 12S rRNA gene sequence variation (∼440 bp) in 17 newly obtained sequences and 90 published cattle, yak, buffalo, goat, and pig sequences, which represent 62 breeds and 17 geographic regions. Based on the defined species-specific variations, two endonucleases, Alu I and Bfa I, were selected for species authen...
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