نتایج جستجو برای: exiguobacterium sh3

تعداد نتایج: 2831  

Journal: :Proceedings of the National Academy of Sciences of the United States of America 1995
R J Rickles M C Botfield X M Zhou P A Henry J S Brugge M J Zoller

The Src homology 3 (SH3) domain is a 50-aa modular unit present in many cellular proteins involved in intracellular signal transduction. It functions to direct protein-protein interactions through the recognition of proline-rich motifs on associated proteins. SH3 domains are important regulatory elements that have been demonstrated to specify distinct regulatory pathways important for cell grow...

1995
Lucy Y. Pao William E. Singhose

We investigate the characteristics of constant-amplitude input shapers for robust time-optimal maneuvers of exi-ble structures. Trends in the timing of the shaper impulses are shown as a function of the system damping constant and move distance. The insensitivity to modeling errors, time-optimality, amount of vibration caused during maneuvers, and high frequency excitation of these shapers are ...

2013
Omar F. Ordoñez Esteban Lanzarotti Daniel Kurth Marta F. Gorriti Santiago Revale Néstor Cortez Martin P. Vazquez María E. Farías Adrian G. Turjanski

Exiguobacterium sp. strain S17 is a moderately halotolerant, arsenic-resistant bacterium that was isolated from Laguna Socompa stromatolites in the Argentinian Puna. The draft genome sequence suggests potent enzyme candidates that are essential for survival under multiple environmental extreme conditions, such as high levels of UV radiation, elevated salinity, and the presence of critical arsen...

2013
Jose L. Ortega Roldan Salvador Casares Malene Ringkjøbing Jensen Nayra Cárdenes Jerónimo Bravo Martin Blackledge Ana I. Azuaga Nico A. J. van Nuland

SH3 domains constitute a new type of ubiquitin-binding domains. We previously showed that the third SH3 domain (SH3-C) of CD2AP binds ubiquitin in an alternative orientation. We have determined the structure of the complex between first CD2AP SH3 domain and ubiquitin and performed a structural and mutational analysis to decipher the determinants of the SH3-C binding mode to ubiquitin. We found ...

Journal: :Analytical biochemistry 1997
M Yamabhai B K Kay

Sixteen-amino-acid-long peptides, corresponding to the optimal ligand preferences of the Src homology 3 (SH3) domains of Abl, Cortactin, Crk, p53BP2, and Src, were fused to the N-terminus of Escherichia coli alkaline phosphatase (AP). These secreted fusion proteins have been used as one-step detection probes of peptide ligand-SH3 domain interactions on microtiter plates and membranes. The bindi...

2012
Zuzana Tatárová Jan Brábek Daniel Rösel Marian Novotný

BACKGROUND SH3 domains are eukaryotic protein domains that participate in a plethora of cellular processes including signal transduction, proliferation, and cellular movement. Several studies indicate that tyrosine phosphorylation could play a significant role in the regulation of SH3 domains. RESULTS To explore the incidence of the tyrosine phosphorylation within SH3 domains we queried the P...

2009
Raffi Tonikian Xiaofeng Xin Christopher P. Toret David Gfeller Christiane Landgraf Simona Panni Serena Paoluzi Luisa Castagnoli Bridget Currell Somasekar Seshagiri Haiyuan Yu Barbara Winsor Marc Vidal Mark B. Gerstein Gary D. Bader Rudolf Volkmer Gianni Cesareni David G. Drubin Philip M. Kim Sachdev S. Sidhu Charles Boone

SH3 domains are peptide recognition modules that mediate the assembly of diverse biological complexes. We scanned billions of phage-displayed peptides to map the binding specificities of the SH3 domain family in the budding yeast, Saccharomyces cerevisiae. Although most of the SH3 domains fall into the canonical classes I and II, each domain utilizes distinct features of its cognate ligands to ...

Journal: :Biochemical Society transactions 2005
G Mirey A Soulard C Orange S Friant B Winsor

SH3 (Src homology-3) domains are involved in protein-protein interactions through proline-rich domains. Many SH3-containing proteins are implicated in actin cytoskeleton organization. The aim of our ongoing work is to study the functions of the SH3-containing proteins in actin cytoskeleton regulation. The yeast Saccharomyces cerevisiae proteome includes 29 SH3 domains distributed in 25 proteins...

2015
De-Chao Zhang Yan-Xia Liu Ying-Yi Huo Xue-Wei Xu Xin-Zheng Li

Exiguobacterium sp. strain JLM-2 is a thermophilic bacterium isolated from deep-sea ferromanganese (FeMn) nodules. The estimated genome of this strain is 2.9 Mb, with a G+C content of 48.32%. It has a novel circular 15,570-bp plasmid. The draft genome sequence may provide useful information about Mn-microbe interactions and the genetic basis for tolerance to environment stresses.

2013
Xu Jiang Yanfen Xue Limin Wang Bo Yu Yanhe Ma

Exiguobacterium sp. strain 8-11-1 is a newly isolated alkaliphile, which was reported to efficiently produce l-lactate using NaOH as the neutralizing agent. Here, we present the first 2.9-Mb assembly of its genome sequence, which may provide useful information related to its efficient lactate production and sodium ion tolerance capacities.

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