Setting appropriate bin sizes to aggregate hyphenated high-resolution mass spectrometry data, belonging to similar mass over charge (m/z) channels, is vital to metabolite quantification and further identification. In a high-resolution mass spectrometer when mass accuracy (ppm) varies as a function of molecular mass, which usually is the case while reading m/z from low to high values, it becomes...

Ridom TraceEdit is a cross-platform graphical DNA trace viewer and editor. TraceEdit displays the chromatogram files from Applied Biosystems automated sequencers and files in the Staden SCF format. Incorrect base calls can be edited and saved.

An optimization method based on uniform design in conjunction with genetic algorithm is described. According to the proposed method, the uniform design technique was applied to the design of starting experiments, which can reduce the number of experiments compared with traditional simultaneous methods, such as simplex. And genetic algorithm was used in optimization procedure, which can improve ...

The high-resolution uv analyzer has been used to investigate the effect of diet on urine profile. In addition, new applications in the food and beverage industry appear promising. More than 100compounds, acidic to basic, can be separated. The clinical analyst may be interested in scanning a wide variety of compounds or in rapid separation of only a few compounds. For the latter purpose, the eff...

A new NMF algorithm has been proposed for the deconvolution of overlapping chromatograms of chemical mixture. Most of the NMF algorithms used so far for chromatogram separation do not converge to a stable limit point. To get same results for all the runs, instead of random initialization, three different initialization methods have been used namely, ALS-NMF (robust initialization), NNDSVD based...

Two-dimensional gas chromatography (GC×GC) plays a central role into the elucidation of complex samples. The automation of the identification of peak areas is of prime interest to obtain a fast and repeatable analysis of chromatograms. To determine the concentration of compounds or pseudo-compounds, templates of blobs are defined and superimposed on a reference chromatogram. The templates then ...

A method for the quantitation of proteinaceous selenocysteine (SeCys) in Se-rich yeast was developed. The method is based on the reduction of the Se-Se and S-Se bridges with dithiotretiol, derivatization with iodoacetamide (carbamidomethylation), followed by HPLC-ICP MS. The chromatographic conditions were optimized for the total recovery of the proteinaceous selenocysteine, the minimum number ...