Recent advances in our ability to watch the molecular and cellular processes of life in action--such as atomic force microscopy, optical tweezers and Forster fluorescence resonance energy transfer--raise challenges for digital signal processing (DSP) of the resulting experimental data. This article explores the unique properties of such biophysical time series that set them apart from other sig...

Many biologically important macromolecules undergo motions that are essential to their function. Biophysical techniques can now resolve the motions of single molecules down to the nanometer scale or even below, providing new insights into the mechanisms that drive molecular movements. This review outlines the principal approaches that have been used for high-resolution measurements of single-mo...

In the first paper of this series, we study the level population problem of recombining carbon ions. We focus our study on high quantum numbers anticipating observations of Carbon Radio Recombination Lines to be carried out by the LOw Frequency ARray (LOFAR). We solve the level population equation including angular momentum levels with updated collision rates up to high principal quantum number...

The influence of atomic interactions on time-dependent tunneling processes of Bose-Einstein condensates is investigated. In a variety of contexts the relevant condensate dynamics can be described by a Landau-Zener equation modified by the appearance of nonlinear contributions. Based on this equation it is discussed how the interactions modify the tunneling probability. In particular, it is show...

We develop a theoretical description of photoassociative stimulated Raman adiabatic passage (STIRAP) near a Feshbach resonance in a thermal atomic gas. We show that it is possible to use low-intensity laser pulses to directly excite pairs of atoms in the continuum near a Feshbach resonance and to transfer most of the atomic cloud to the lowest rovibrational level of the molecular ground state. ...

A phase-stabilized femtosecond laser comb is directly used for high-resolution spectroscopy and absolute optical frequency measurements of one- and two-photon transitions in laser-cooled 87Rb atoms. Absolute atomic transition frequencies, such as the 5S1/2 F=2-->7S1/2 F"=2 two-photon resonance measured at 788,794 768,921 (44) kHz, are determined without a priori knowledge about their values. De...

A scheme for addressing individual atoms in one- or two-dimensional optical lattices loaded with one atom per site is proposed. The scheme is based on position-dependent atomic population transfer induced by several standing-wave driving fields. This allows various operations important in quantum-information processing, such as manipulation and measurement of any single-atom, two-qubit operatio...