نتایج جستجو برای: مدلسازی لوپ cdr h3

تعداد نتایج: 28355  

Journal: :Journal of molecular biology 2007
Frederic A Fellouse Kaori Esaki Sara Birtalan Demetrios Raptis Vincenzo J Cancasci Akiko Koide Parkash Jhurani Mark Vasser Christian Wiesmann Anthony A Kossiakoff Shohei Koide Sachdev S Sidhu

We have previously established a minimalist approach to antibody engineering by using a phage-displayed framework to support complementarity determining region (CDR) diversity restricted to a binary code of tyrosine and serine. Here, we systematically augmented the original binary library with additional levels of diversity and examined the effects. The diversity of the simplest library, in whi...

2016
Catherine L. Townsend Julie M. J. Laffy Yu-Chang Bryan Wu Joselli Silva O’Hare Victoria Martin David Kipling Franca Fraternali Deborah K. Dunn-Walters

Antibody variable regions are composed of a heavy and a light chain, and in humans, there are two light chain isotypes: kappa and lambda. Despite their importance in receptor editing, the light chain is often overlooked in the antibody literature, with the focus being on the heavy chain complementarity-determining region (CDR)-H3 region. In this paper, we set out to investigate the physicochemi...

2016
Harry W. Schroeder Paolo Casali Gregory C. Ippolito Catherine L. Townsend Julie M. J. Laffy Yu-Chang Bryan Wu Joselli Silva O’Hare Victoria Martin David Kipling Deborah K. Dunn-Walters

Antibody variable regions are composed of a heavy and a light chain, and in humans, there are two light chain isotypes: kappa and lambda. Despite their importance in receptor editing, the light chain is often overlooked in the antibody literature, with the focus being on the heavy chain complementarity-determining region (CDR)-H3 region. In this paper, we set out to investigate the physicochemi...

Journal: :Cell 2013
Feng Wang Damian C. Ekiert Insha Ahmad Wenli Yu Yong Zhang Omar Bazirgan Ali Torkamani Terje Raudsepp Waithaka Mwangi Michael F. Criscitiello Ian A. Wilson Peter G. Schultz Vaughn V. Smider

Some species mount a robust antibody response despite having limited genome-encoded combinatorial diversity potential. Cows are unusual in having exceptionally long CDR H3 loops and few V regions, but the mechanism for creating diversity is not understood. Deep sequencing reveals that ultralong CDR H3s contain a remarkable complexity of cysteines, suggesting that disulfide-bonded minidomains ma...

2012
Gregory C. Ippolito Kam Hon Hoi Sai T. Reddy Sean M. Carroll Xin Ge Tobias Rogosch Michael Zemlin Leonard D. Shultz Andrew D. Ellington Carla L. VanDenBerg George Georgiou

Immunodeficient mice reconstituted with human hematopoietic stem cells enable the in vivo study of human hematopoiesis. In particular, NOD-scid-IL2Rγ(null) engrafted mice have been shown to have reasonable levels of T and B cell repopulation and can mount T-cell dependent responses; however, antigen-specific B-cell responses in this model are generally poor. We explored whether developmental de...

Journal: :Science immunology 2016
Robyn L Stanfield Ian A Wilson Vaughn V Smider

A subset of bovine antibodies have an exceptionally long third heavy-chain complementarity determining region (CDR H3) that is highly variable in sequence and includes multiple cysteines. These long CDR H3s (up to 69 residues) fold into a long stalk atop which sits a knob domain that is located far from the antibody surface. Three new bovine Fab crystal structures have been determined to deciph...

Journal: :Cell 2015
Tongqing Zhou Rebecca M. Lynch Lei Chen Priyamvada Acharya Xueling Wu Nicole A. Doria-Rose M. Gordon Joyce Daniel Lingwood Cinque Soto Robert T. Bailer Michael J. Ernandes Rui Kong Nancy S. Longo Mark K. Louder Krisha McKee Sijy O’Dell Stephen D. Schmidt Lillian Tran Zhongjia Yang Aliaksandr Druz Timothy S. Luongo Stephanie Moquin Sanjay Srivatsan Yongping Yang Baoshan Zhang Anqi Zheng Marie Pancera Tatsiana Kirys Ivelin S. Georgiev Tatyana Gindin Hung-Pin Peng An-Suei Yang James C. Mullikin Matthew D. Gray Leonidas Stamatatos Dennis R. Burton Wayne C. Koff Myron S. Cohen Barton F. Haynes Joseph P. Casazza Mark Connors Davide Corti Antonio Lanzavecchia Quentin J. Sattentau Robin A. Weiss Anthony P. West Pamela J. Bjorkman Johannes F. Scheid Michel C. Nussenzweig Lawrence Shapiro John R. Mascola Peter D. Kwong

The site on the HIV-1 gp120 glycoprotein that binds the CD4 receptor is recognized by broadly reactive antibodies, several of which neutralize over 90% of HIV-1 strains. To understand how antibodies achieve such neutralization, we isolated CD4-binding-site (CD4bs) antibodies and analyzed 16 co-crystal structures -8 determined here- of CD4bs antibodies from 14 donors. The 16 antibodies segregate...

2013
Yu-Ching Lee Keng-Chang Tsai Sy-Jye Leu Tuan-Jen Wang Chia-Yu Liu Yi-Yuan Yang

We have previously isolated several IgG rheumatoid factors (RFs) from patients with both rheumatoid arthritis and idiopathic thrombocytopenia purpura using phage display system. To study IgG RFs in patients with other autoimmune diseases, phage display antibody libraries from a hepatitis C virus infected patient with Sjögren's syndrome were constructed. After panning, a specific clone RFL11 was...

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