نتایج جستجو برای: protein secondary structure prediction

تعداد نتایج: 3043275  

Journal: :Proceedings of the National Academy of Sciences 1989

2013
Xinbiao Gan Cong liu Zhiying Wang Li Shen Qi Zhu Jie Liu Lihua Chi Yihui Yan Bin Yu

Protein secondary structure prediction is very important for its molecular structure. GOR algorithm is one of the most successful computational methods and has been widely used as an efficient analysis tool to predict secondary structure from protein sequence. However, the running time is unbearable with sharp growth in protein database. Fortunately, CUDA (Compute Unified Device Architecture) p...

2012
BY Y. WEI J. THOMPSON C. A. FLOUDAS

Most of the protein structure prediction methods use a multi-step process, which often includes secondary structure prediction, contact prediction, fragment generation, clustering, etc. For many years, secondary structure prediction has been the workhorse for numerous methods aimed at predicting protein structure and function. This paper presents a new mixed integer linear optimization (MILP)-b...

Journal: :iranian journal of biotechnology 2013
hesamedin torabi dashti fatemeh zare-mirakabad nima aghaeepour hayedeh ahrabian abbas nowzari-dalini

background: rna molecules play many important regulatory, catalytic and structuralroles in the cell, and rna secondary structure prediction with pseudoknots is one themost important problems in biology. an rna pseudoknot is an element of the rna secondary structure in which bases of a single-stranded loop pair with complementary basesoutside the loop. modeling these nested structures (pseudokno...

2012
P. J. Magesh Kasturi brindha

The database provides the information about the non-redundant protein dataset (1573 proteins) obtained from the Protein Data Bank. The information includes PDB ID, Length of the protein, Resolution, PDB Secondary structure, PDB secondary structure summary, PHD secondary structure prediction, PHD secondary structure prediction summary, sequence. We further revised the PDB Secondary structure sum...

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