conclusions based on the location of detected rccs in the structure of hbv proteins, it was found that these rccs may have a critical role in correct folding of hbv proteins and can be considered as drug targets. the results of this study provide new and deep perspectives about structure of hbv proteins for further researches and designing new drugs for treatment of hbv. results the pfam search...

In this article, we show that magnitude homology and path are closely related, give some applications. We define differentials MH k ℓ ( G ) ⟶ − 1 $\operatorname{MH}^{\ell }_k(G) \longrightarrow \operatorname{MH}^{\ell -1}_{k-1}(G)$ between homologies of a digraph $G$ , which make them chain complexes. Then its $\mathcal {MH}^{\ell }_k(G)$ is non-trivial homotopy invariant in the context ‘homoto...

background : the aim of this study was to generate in silico 3d-structure of the envelope protein of ahfv using homology modeling method to further predict its conformational epitopes and help other studies to investigate its structural features using the model. methods : a 3d-structure prediction was developed for the envelope protein of alkhumra haemorrhagic fever virus (ahfv), an emerging ti...

In the present study we attempted to correlate the structure and function of the cry11a (72 kDa) and cry4a (135 kDa) proteins of Bacillus thuringiensis var israelensis. Homology modeling and secondary structure predictions were done to locate most probable regions for finding helices or strands in these proteins. The JPRED (JPRED consensus secondary structure prediction server) secondary struct...

sequence analysis and phylogenetic study of hemagglutinin (ha) gene of h9n2 subtype of avian influenza virus isolates (outbreaks of 1998-2002) in tehran province (iran) were studied. two sets of forward and reverse primers in highly conserved regions, based on sequences of ha gene in genbank, were designed. pcr products of a 430-bp fragment of 16 isolates were sequenced and then were aligned wi...