The DNA sequences of the Oka varicella vaccine virus (V-Oka) and its parental virus (P-Oka) were completed. Comparison of the sequences revealed 42 base substitutions, which led to 20 amino acid conversions and length differences in tandem repeat regions (R1, R3, and R4) and in an origin of DNA replication. Amino acid substitutions existed in open reading frames (ORFs) 6, 9A, 10, 21, 31, 39, 50...

Two experiments were conducted to compare performance and metabolic responses of beef females consuming low-quality forages and offered an energy supplement based on fibrous byproducts daily (S7) or 3 times per week (S3) at similar weekly rates. In Exp. 1, BW gain, reproductive performance, mRNA expression of hepatic and skeletal muscle genes associated with nutritional metabolism and growth, a...

BACKGROUND Ribosomal protein S7, a crucial RNA-binding component of the ribosome, is one of two proteins that initiates assembly of the 30S ribosomal subunit. It is required for proper folding of a large 3' domain of 16S ribosomal RNA. S7 regulates its own synthesis by binding to its own mRNA. This ability of S7 to bind both messenger and ribosomal RNAs makes determination of its mode of RNA re...

Cholera-like enterotoxin produced by a non-O1 strain of Vibrio cholerae, S7 (S7 enterotoxin), isolated from human diarrheal stool, was purified, and its physicochemical, biological, and immunological properties were compared with those of cholera enterotoxin from V. cholerae O1 569B (CT) and an enterotoxin produced by another non-O1 V. cholerae (E8498 enterotoxin) reported previously (Yamamoto ...

The stress-responding protein, GADD45α, plays important roles in cell cycle checkpoint, DNA repair and apoptosis. In our recent study, we demonstrate that GADD45α undergoes a dynamic ubiquitination and degradation in vivo, which process can be blocked by the cytotoxic reagent, arsenite, resulting in GADD45α accumulation to activate JNKs cell death pathway, thereby revealing a novel mechanism fo...

Notothenioids represent an adaptive radiation of teleost fishes in the frigid and ice-laden waters of the Southern Ocean surrounding Antarctica. Phylogenetic hypotheses for this clade have resulted primarily from analyses of mtDNA gene sequences, and studies utilizing nuclear gene DNA sequence data have focused on particular sub-clades of notothenioid fishes. In this study, we provide the first...

Yes. RNA-seq can be used to quantify transcript levels from a sample. In order to perform useful statistics, one sample is insufficient. Replicates must be used to appropriately power such statistics. The RNA-seq method is an impressive advancement with many applications for studying RNA biology but it does not eliminate biological variability. If the input samples are heavily degraded or have ...

Acidovorax sp. strain MR-S7 was isolated from activated sludge in a treatment system for wastewater containing β-lactam antibiotic pollutants. Strain MR-S7 demonstrates multidrug resistance for various types of β-lactam antibiotics at high levels of MIC. The draft genome sequence clarified that strain MR-S7 harbors unique β-lactamase genes.

Two recently published but independently derived structures, namely the X-ray crystallographic structure of ribosomal protein S7 and the "binding pocket" for this protein in a three-dimensional model of the 16S rRNA, have been correlated with one another. The known rRNA-protein interactions for S7 include a minimum binding site, a number of footprint sites, and two RNA-protein crosslink sites o...

In the paper we investigate Birkhoff’s conditions (Bi) and (Bi∗). We prove that a discrete lattice L satisfies the condition (Bi) (the condition (Bi∗)) if and only if L is a 4-cell lattice not containing a cover-preserving sublattice isomorphic to the lattice S∗ 7 (the lattice S7). As a corollary we obtain a well known result of J. Jakub́ık from [6]. Furthermore, lattices S7 and S ∗ 7 are consid...