Consideration of the scale at which communities are defined both taxonomically and spatially can reconcile apparently contradictory results on the extent to which plants show phylogenetic niche conservatism. In plant communities in north central Florida, we collected species abundances in 55 0.1-ha plots in several state parks. When communities were defined narrowly to include a single phylogen...

conclusions these results indicate that the pcr method is a powerful genotypic assay for the detection of adhesin-encoding operons. thus, this assay can be recommended for clinical use to detect virulent urinary e. coli strains, as well as epidemiological studies. materials and methods a total of 100 upec isolates were obtained from urine samples of patients with uti. the prevalence of 5 virule...

The relation of homology is generally characterized as an identity relation, or alternatively as a correspondence relation, both of which are transitive. We use the example of the ontogenetic development and evolutionary origin of the gnathostome jaw to discuss identity and transitivity of the homology relation under the transformationist and emergentist paradigms respectively. Token identity a...

In as much as our paper (de Queiroz and Donoghue, 1988) was intended to be a contribution to, rather than a criticism of, phylogenetic systematics, it seems odd that Nelson (1989: 277) views our efforts as being "potentially destructive to the independence of cladistics". On closer inspection, however, Nelson's reaction is understandable as a manifestation of fundamental differences between wha...

The aim of this study is to investigate the relation that can be found between the phylogeny of a large set of complete chloroplast genomes, and the evolution of gene content inside these sequences. Core and pan genomes have been computed on de novo annotation of these 845 genomes, the former being used for producing well-supported phylogenetic tree while the latter provides information regardi...

background: h9n2 avian influenza viruses (aiv) a have become panzootic in eurasia over the last decade and have caused several human infections in iran since 1998 and inactivated vaccine has been used in chickens to control the disease. objectives: the purpose of this study was to analyze h9n2 viruses that have infected broiler in tehran province, iran between 1998 and 2008 based on matrix gene...

BACKGROUND The emergence and propagation of different phylogenetic groups of antimicrobial-resistant E. coli have become a worldwide health concern in human and veterinary medicine. Therefore, the evaluation of the phylogenetic distribution of antibiotic-resistant E. coli is important for therapeutic and economic purposes. The aims of this study were to determine phylogenetic groups and pattern...