نتایج جستجو برای: haloalkane dehalogenase

تعداد نتایج: 829  

Journal: :Chembiochem : a European journal of chemical biology 2012
Jan G E van Leeuwen Hein J Wijma Robert J Floor Jan-Metske van der Laan Dick B Janssen

We used directed evolution to obtain enantiocomplementary haloalkane dehalogenase variants that convert the toxic waste compound 1,2,3-trichloropropane (TCP) into highly enantioenriched (R)- or (S)-2,3-dichloropropan-1-ol, which can easily be converted into optically active epichlorohydrins-attractive intermediates for the synthesis of enantiopure fine chemicals. A dehalogenase with improved ca...

Journal: :Acta Crystallographica Section A Foundations of Crystallography 2005

Journal: :Protein engineering 1998
J Damborský M Bohác M Prokop M Kutý J Koca

The application of molecular modelling and quantum-chemistry calculations for the 'computational site-directed mutagenesis' of haloalkane dehalogenase is described here. The exhaustive set of single point mutants of haloalkane dehalogenase in position 172 was constructed by homology modelling. The ability of substituting residues to stabilize the halide ion formed during the dehalogenation reac...

Journal: :Archives of biochemistry and biophysics 2002
Andrzej Lewandowicz Juliusz Rudzinski Lusong Luo Debra Dunaway-Mariano Piotr Paneth

The chlorine kinetic isotope effect (KIE) on the dehalogenation of 4-chlorobenzoyl-CoA catalyzed by 4-chlorobenzoyl-CoA dehalogenase has been measured at room temperature and optimal pH. The measured value of (37)k = 1.0090 +/- 0.0006 is larger than the KIEs recently measured for haloalkane and fluoroacetate dehalogenase. This indicates that the transition state for dissociation of chloride ion...

Journal: :Current opinion in structural biology 2003
René M de Jong Bauke W Dijkstra

The dehalogenases make use of fundamentally different strategies to cleave carbon-halogen bonds. The structurally characterized haloalkane dehalogenases, haloacid dehalogenases and 4-chlorobenzoate-coenzyme A dehalogenases use substitution mechanisms that proceed via a covalent aspartyl intermediate. Recent X-ray crystallographic analysis of a haloalcohol dehalogenase and a trans-3-chloroacryli...

Journal: :Protein engineering 1999
J Damborský J Koca

Haloalkane dehalogenases catalyse environmentally important dehalogenation reactions. These microbial enzymes represent objects of interest for protein engineering studies, attempting to improve their catalytic efficiency or broaden their substrate specificity towards environmental pollutants. This paper presents the results of a comparative study of haloalkane dehalogenases originating from di...

2013
Jasvinder Kaur Helianthous Verma Charu Tripathi J. P. Khurana Rup Lal

Sphingobium baderi strain LL03(T) was isolated from hexachlorocyclohexane (HCH)-contaminated soil from Spolana, Czech Republic. Strain LL03(T) is a mutant that is deficient in linB and linC (genes that encode hexachlorocyclohexane haloalkane dehalogenase and dehydrogenase, respectively). The draft genome sequence of LL03(T) (~4.85 Mb) consists of 92 contigs and 4,914 coding sequences, with a G+...

Journal: :Protein science : a publication of the Protein Society 2012
Jennifer J Gehret Liangcai Gu Todd W Geders William Clay Brown Lena Gerwick William H Gerwick David H Sherman Janet L Smith

DmmA is a haloalkane dehalogenase (HLD) identified and characterized from the metagenomic DNA of a marine microbial consortium. Dehalogenase activity was detected with 1,3-dibromopropane as substrate, with steady-state kinetic parameters typical of HLDs (K(m) = 0.24 ± 0.05 mM, k(cat) = 2.4 ± 0.1 s(-1) ). The 2.2-Å crystal structure of DmmA revealed a fold and active site similar to other HLDs...

Journal: :Biochemistry 1993
K H Verschueren J Kingma H J Rozeboom K H Kalk D B Janssen B W Dijkstra

Haloalkane dehalogenase from Xanthobacter autotrophicus GJ10 catalyzes the conversion of 1,2-dichloroethane to 2-chloroethanol and chloride without use of oxygen or cofactors. The active site is situated in an internal cavity, which is accessible from the solvent, even in the crystal. Crystal structures of the dehalogenase enzyme complexed with iodoacetamide, chloroacetamide, iodide, and chlori...

Journal: :Analytical chemistry 2016
Sarka Bidmanova Mark-Steven Steiner Martin Stepan Kamila Vymazalova Michael A Gruber Axel Duerkop Jiri Damborsky Zbynek Prokop Otto S Wolfbeis

Sulfur mustard is a chemical agent of high military and terroristic significance. No effective antidote exists, and sulfur mustard can be fairly easily produced in large quantity. Rapid field testing of sulfur mustard is highly desirable. Existing analytical devices for its detection are available but can suffer from low selectivity, laborious sample preparation, and/or the need for complex ins...

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