نتایج جستجو برای: codon preference optimization

تعداد نتایج: 401777  

Journal: :journal of agricultural science and technology 2014
l. h. deng l. s. weng g. y. xiao

the alternative use of non-selective herbicides in different years will reduce the possibility of weeds resistance to herbicide by avoiding the crops constant exposure to herbicide selection pressure. the photoperiod-sensitive genic male sterile (pgms) rice with herbicide resistance will be convenient to the mechanization of hybrid seed production and weed control. in order to develop double he...

Journal: :Journal of Discrete Algorithms 2012

Journal: :PLoS ONE 2008
Kholiswa C. Ngumbela Kieran P. Ryan Rohini Sivamurthy Mark A. Brockman Rajesh T. Gandhi Nina Bhardwaj Daniel G. Kavanagh

BACKGROUND The sequences of wild-isolate strains of Human Immunodeficiency Virus-1 (HIV-1) are characterized by low GC content and suboptimal codon usage. Codon optimization of DNA vectors can enhance protein expression both by enhancing translational efficiency, and by altering RNA stability and export. Although gag codon optimization is widely used in DNA vectors and experimental vaccines, th...

2013
Mian Zhou Jinhu Guo Joonseok Cha Michael Chae She Chen Jose M. Barral Matthew S. Sachs Yi Liu

Codon-usage bias has been observed in almost all genomes and is thought to result from selection for efficient and accurate translation of highly expressed genes. Codon usage is also implicated in the control of transcription, splicing and RNA structure. Many genes exhibit little codon-usage bias, which is thought to reflect a lack of selection for messenger RNA translation. Alternatively, howe...

2017
Yu Sun Daniel Tamarit Siv G.E. Andersson

The major codon preference model suggests that codons read by tRNAs in high concentrations are preferentially utilized in highly expressed genes. However, the identity of the optimal codons differs between species although the forces driving such changes are poorly understood. We suggest that these questions can be tackled by placing codon usage studies in a phylogenetic framework and that bact...

, , Dabaghian, Mehran, Mansouri, Reza, Moghaddam, Farnaz, Taghizadeh, Morteza,

Introduction: According to marked advances in bioinformatics studies, development of influenza vaccines has been greatly modified in many studies. In this study, we have designed a multi-epitope recombinant protein, consisting of several conserved epitopes from Hemagglutinin protein of the H1N1 and H5N1 strains of Influenza virus by immunoinformatics approaches. Materials and Methods: The regis...

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