Mathematical and computational modeling of calcium signalling in nerve cells has produced considerable insights into how the cells contracts with other cells under the variation of biophysical and physiological parameters. The modeling of calcium signaling in astrocytes has become more sophisticated. The modeling effort has provided insight to understand the cell contraction. Main objective of ...

Numerical methods are presented for simulating stochastic-in-time current pulses for an electrodiffusion model of the biological channel, with a fixed applied voltage across the channel. The electrodiffusion model consists of the parabolic advection-diffusion equation coupled either to Gauss' law or Poisson's equation, depending on the choice of boundary conditions. The TRBDF2 method is employe...

Time-dependent advection-diffusion equations arise in mathematical models of porous medium flow and transport processes, including petroleum reservoir simulation, environmental modeling, and other applications. In such applications as immiscible displacement of oil by water in a secondary oil recovery process in petroleum industry or a groundwater transport process involving a non-aqueous phase...

We study the effect of the streamline upwind/Petrov Galerkin (SUPG) stabilized finite element method on the discretization of optimal control problems governed by linear advection-diffusion equations. We compare two approaches for the numerical solution of such optimal control problems. In the discretize-then-optimize approach the optimal control problem is first discretized, using the SUPG met...

Atmospheric air pollution turbulent fluxes can be assumed proportional to the mean concentration gradient. This assumption, along with the equation of continuity, leads to the advection-diffusion equation. Moreover, large eddies are able to mix scalar quantities in a manner that is counter to the local gradient. In this work we present an analytical solution of the three-dimensional steady stat...

This note recounts detailed stability and accuracy analysis of a scalar advection-diffusion equation.

We formulate the generalized master equation for a class of continuous-time random walks in the presence of a prescribed deterministic evolution between successive transitions. This formulation is exemplified by means of an advection-diffusion and a jump-diffusion scheme. Based on this master equation, we also derive reaction-diffusion equations for subdiffusive chemical species, using a mean-f...

This paper is concerned with the existence, uniqueness and globally asymptotic stability of traveling wave fronts in the quasi-monotone reaction advection diffusion equations with nonlocal delay. Under bistable assumption, we construct various pairs of superand subsolutions and employ the comparison principle and the squeezing technique to prove that the equation has a unique nondecreasing trav...

This study investigates the viscous term formulation for the newly developed energy stable flux reconstruction (ESFR) scheme, as an extension to the linear advection flux formulation in the original ESFR scheme. The concept of energy stability for the flux reconstruction approach is put forward. This paper also discusses the formulation of inviscid first derivative flux based on flux reconstruc...