نتایج جستجو برای: single nucleotide polymo rphisms

تعداد نتایج: 949918  

2017
Chenyang Hao Yuquan Wang Shiaoman Chao Tian Li Hongxia Liu Lanfen Wang Xueyong Zhang

A Chinese wheat mini core collection was genotyped using the wheat 9 K iSelect SNP array. Total 2420 and 2396 polymorphic SNPs were detected on the A and the B genome chromosomes, which formed 878 haplotype blocks. There were more blocks in the B genome, but the average block size was significantly (P < 0.05) smaller than those in the A genome. Intense selection (domestication and breeding) had...

Journal: :Annual review of genomics and human genetics 2001
P Y Kwok

One of the fruits of the Human Genome Project is the discovery of millions of DNA sequence variants in the human genome. The majority of these variants are single nucleotide polymorphisms (SNPs). A dense set of SNP markers opens up the possibility of studying the genetic basis of complex diseases by population approaches. In all study designs, a large number of individuals must be genotyped wit...

Journal: :Genetics 2009
Jonathan D Gruber Anthony D Long

Gene expression levels vary heritably, with approximately 25-35% of the loci affecting expression acting in cis. We characterized standing cis-regulatory variation among 16 wild-derived strains of Drosophila melanogaster. Our experiment's robust biological and technical replication enabled precise estimates of variation in allelic expression on a high-throughput SNP genotyping platform. We obse...

Journal: :Genetic epidemiology 2006
Hansong Wang Duncan C Thomas Itsik Pe'er Daniel O Stram

The much-anticipated fixed-array, genome-wide SNP genotyping technologies make large-scale genome-wide association scans now possible for large numbers of subjects. In this paper we reconsider the problem (Satagopan and Elston [2003] Genet Epidemiol 25:149-157) of optimizing a two-stage genotyping design to deal with important new issues that are relevant when studies are expanded from candidat...

2015
Jeremy A. Guggenheim Beate St Pourcain George McMahon Nicholas J. Timpson David M. Evans Cathy Williams

PURPOSE Studies in relatives have generally yielded high heritability estimates for refractive error: twins 75-90%, families 15-70%. However, because related individuals often share a common environment, these estimates are inflated (via misallocation of unique/common environment variance). We calculated a lower-bound heritability estimate for refractive error free from such bias. METHODS Bet...

2010
David Clayton

Homer and others (2008. Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays. PLoS Genetics 4, e1000167) recently showed that, given allele frequency data for a large number of single nucleotide polymorphisms in a sample together with corresponding population "reference" frequencies, by typing an individual's DNA sample...

2016
Mark O. Winfield Alexandra M. Allen Amanda J. Burridge Gary L. A. Barker Harriet R. Benbow Paul A. Wilkinson Jane Coghill Christy Waterfall Alessandro Davassi Geoff Scopes Ali Pirani Teresa Webster Fiona Brew Claire Bloor Julie King Claire West Simon Griffiths Ian King Alison R. Bentley Keith J. Edwards

In wheat, a lack of genetic diversity between breeding lines has been recognized as a significant block to future yield increases. Species belonging to bread wheat's secondary and tertiary gene pools harbour a much greater level of genetic variability, and are an important source of genes to broaden its genetic base. Introgression of novel genes from progenitors and related species has been wid...

2012
Patrick Breheny Prabhakar Chalise Anthony Batzler Liewei Wang Brooke L. Fridley

Recently, structural variation in the genome has been implicated in many complex diseases. Using genomewide single nucleotide polymorphism (SNP) arrays, researchers are able to investigate the impact not only of SNP variation, but also of copy-number variants (CNVs) on the phenotype. The most common analytic approach involves estimating, at the level of the individual genome, the underlying num...

Journal: : 2022

The Single Nucleotide Polymorphisms (SNP) Discovery on Transcriptome of Pure Sistani and Cross-Breeding Holstein, Simmental Monte Billiard Bulls

Akbar Dorgalaleh, Farhad Zaker, Hasan Mollanoori, Hojat Shahraki, Majid Fathi, Maryam Daneshi, Omolbanin Sargazi-Aval, Shadi Tabibian, Shahram Teimourian,

Background: Congenital factor XIII (FXIII) deficiency is one of the rarest bleeding disorders with a prevalence of one per 2 million in the general population. The disorder is accompanied by a high rate of life-threatening bleeding. Due to normal results of routine coagulation tests, diagnosis of the disorder is challenging, but molecular methods can be used for precise diagnosis. Direct mutati...

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