نتایج جستجو برای: resequencing

تعداد نتایج: 2156  

2015
Enzo Emanuele

Article history: Received 19 January 2015 Accepted 19 January 2015 Available online 20 January 2015 ence the risk of common, sporadic forms of autism remains open. It is now widely accepted that rare genetic variants could play an important role in susceptibility to common diseases. In light of Cartier et al.'s results, major resequencing efforts of the SLC6A3 and STX1A genes should be undertak...

Journal: :Bioinformatics 2013
Simon J. McGowan Jim R. Hughes Zong-Pei Han Stephen Taylor

SUMMARY Multi-Image Genome (MIG) viewer is a web-based application for visualizing, querying and filtering many thousands of genome browser regions as well as for exporting the data in a variety of formats. This methodology has been used successfully to analyze ChIP-Seq data and RNA-Seq data and to detect somatic mutations in genome resequencing projects. AVAILABILITY MIG is available at http...

2015
Chiara Batini Pille Hallast Daniel Zadik Pierpaolo Maisano Delser Andrea Benazzo Silvia Ghirotto Eduardo Arroyo-Pardo Gianpiero L. Cavalleri Peter de Knijff Berit Myhre Dupuy Heidi A. Eriksen Turi E. King Adolfo López de Munain Ana M. López-Parra Aphrodite Loutradis Jelena Milasin Andrea Novelletto Horolma Pamjav Antti Sajantila Aslıhan Tolun Bruce Winney Mark A. Jobling

The proportion of Europeans descending from Neolithic farmers ∼ 10 thousand years ago (KYA) or Palaeolithic hunter-gatherers has been much debated. The male-specific region of the Y chromosome (MSY) has been widely applied to this question, but unbiased estimates of diversity and time depth have been lacking. Here we show that European patrilineages underwent a recent continent-wide expansion. ...

Journal: :Applied and environmental microbiology 2010
Dae-Hee Lee Bernhard Ø Palsson

Laboratory adaptive evolution studies can provide key information to address a wide range of issues in evolutionary biology. Such studies have been limited thus far by the inability of workers to readily detect mutations in evolved microbial strains on a genome scale. This limitation has now been overcome by recently developed genome sequencing technology that allows workers to identify all acc...

2010
Nicolas Berthet Alexis Deletoile Virginie Passet Giulia C. Kennedy Jean-Claude Manuguerra Stewart T. Cole Sylvain Brisse

We describe the benefit of using reconstructed ancestral sequences (RAS) on resequencing microarrays for rapid pathogen identification, with Enterobacteriaceae rpoB sequences as a model. Our results demonstrate a sharp improvement of call rate and accuracy when using RASs as compared to extant sequences. This improvement was attributed to the lower sequence divergence of RASs, which also expand...

2012
Yong-Bi Fu

Cultivated flax (Linum usitatissimum L.) is the earliest oil and fiber crop and its early domestication history may involve multiple events of domestication for oil, fiber, capsular indehiscence, and winter hardiness. Genetic studies have demonstrated that winter cultivated flax is closely related to oil and fiber cultivated flax and shows little relatedness to its progenitor, pale flax (L. bie...

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