نتایج جستجو برای: large genomic rearrangements

تعداد نتایج: 1142013  

حیدری, محمد مهدی , خاتمی, مهری ,

Introduction: Long QT Syndrome is one of the arrhythmic disorders of the heart that causes sudden cardiac death in patients. Most of the investigations have focused on nuclear genome for finding genetic defects in these disorders, but some of the cases with LQTS cannot be explained by mutations of identified genes. It prompted the authors to focus on the mitochondrial DNA and monitor rearrangem...

Journal: :Human molecular genetics 2006
Jennifer A Lee Ken Inoue Sau W Cheung Chad A Shaw Pawel Stankiewicz James R Lupski

Genomic architecture, higher order structural features of the human genome, can provide molecular substrates for recurrent sub-microscopic chromosomal rearrangements, or may result in genomic instability by forming structures susceptible to DNA double-strand breaks. Pelizaeus-Merzbacher disease (PMD) is a genomic disorder most commonly arising from genomic duplications of the dosage-sensitive p...

Journal: :Blood 2014
David D W Twa Fong Chun Chan Susana Ben-Neriah Bruce W Woolcock Anja Mottok King L Tan Graham W Slack Jay Gunawardana Raymond S Lim Andrew W McPherson Robert Kridel Adele Telenius David W Scott Kerry J Savage Sohrab P Shah Randy D Gascoyne Christian Steidl

The pathogenesis of primary mediastinal large B-cell lymphoma (PMBCL) is incompletely understood. Recently, specific genotypic and phenotypic features have been linked to tumor cell immune escape mechanisms in PMBCL. We studied 571 B-cell lymphomas with a focus on PMBCL. Using fluorescence in situ hybridization here, we report that the programmed death ligand (PDL) locus (9p24.1) is frequently ...

2013
Abhishek Nag Elena G. Bochukova Barbara Kremeyer Desmond D. Campbell Heike Muller Ana V. Valencia-Duarte Julio Cardona Isabel C. Rivas Sandra C. Mesa Mauricio Cuartas Jharley Garcia Gabriel Bedoya William Cornejo Luis D. Herrera Roxana Romero Eduardo Fournier Victor I. Reus Thomas L. Lowe I. Sadaf Farooqi Carol A. Mathews Lauren M. McGrath Dongmei Yu Ed Cook Kai Wang Jeremiah M. Scharf David L. Pauls Nelson B. Freimer Vincent Plagnol Andrés Ruiz-Linares

Tourette syndrome (TS) is a neuropsychiatric disorder with a strong genetic component. However, the genetic architecture of TS remains uncertain. Copy number variation (CNV) has been shown to contribute to the genetic make-up of several neurodevelopmental conditions, including schizophrenia and autism. Here we describe CNV calls using SNP chip genotype data from an initial sample of 210 TS case...

2002
Hidewaki Nakagawa Hai Yan Janet Lockman Heather Hampel Kenneth W. Kinzler Bert Vogelstein Albert de la Chapelle

Mutations that alter normal splice patterns and genomic rearrangements are common causes of hereditary diseases including hereditary nonpolyposis colorectal cancer. However, abnormal transcripts can be difficult to detect and interpret because splicing patterns are often heterogeneous even in normal cells. Standard techniques including sequencing and Southern hybridization fail to detect some g...

Journal: :Cancer research 2002
Hidewaki Nakagawa Hai Yan Janet Lockman Heather Hampel Kenneth W Kinzler Bert Vogelstein Albert De La Chapelle

Mutations that alter normal splice patterns and genomic rearrangements are common causes of hereditary diseases including hereditary nonpolyposis colorectal cancer. However, abnormal transcripts can be difficult to detect and interpret because splicing patterns are often heterogeneous even in normal cells. Standard techniques including sequencing and Southern hybridization fail to detect some g...

2015
Gunther Boysen Christopher E Barbieri Davide Prandi Mirjam Blattner Sung-Suk Chae Arun Dahija Srilakshmi Nataraj Dennis Huang Clarisse Marotz Limei Xu Julie Huang Paola Lecca Sagar Chhangawala Deli Liu Pengbo Zhou Andrea Sboner Johann S de Bono Francesca Demichelis Yariv Houvras Mark A Rubin Joaquín M Espinosa

Genomic instability is a fundamental feature of human cancer often resulting from impaired genome maintenance. In prostate cancer, structural genomic rearrangements are a common mechanism driving tumorigenesis. However, somatic alterations predisposing to chromosomal rearrangements in prostate cancer remain largely undefined. Here, we show that SPOP, the most commonly mutated gene in primary pr...

2007
Max A. Alekseyev

Multi-break rearrangements break a genome into multiple fragments and further glue them together in a new order. While 2break rearrangements represent standard reversals, fusions, fissions, and translocations operations; 3-break rearrangements are a natural generalization of transpositions and inverted transpositions. Multi-break rearrangements in circular genomes were studied in depth in [1] a...

Background & Objective: Soft tissue sarcomas (STS) constitute an uncommon and heterogeneous group of tumors of mesenchymal origin and various cytogenetic abnormalities ranging from distinct genomic rearrangements, such as chromosomal translocations and amplifications, to more intricate rearrangements involving multiple chromosomes. Fluorescence in situ...

2015
Nikita Alexeev Rustem Aidagulov Max A. Alekseyev

Genome rearrangements are evolutionary events that shuffle genomic architectures. Most frequent genome rearrangements are reversals, translocations, fusions, and fissions. While there are some more complex genome rearrangements such as transpositions, they are rarely observed and believed to constitute only a small fraction of genome rearrangements happening in the course of evolution. The anal...

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