We recently developed an all-atom free energy forcefield (PFF01) for protein structure prediction with stochastic optimization methods. We demonstrated that PFF01 correctly predicts the native conformation of several proteins as the global optimum of the free energy surface. Here we review recent folding studies, which permitted the reproducible all-atom folding of the 20 amino-acid trp-cage pr...

a mild and green method has been developed for the preparation of coumarins derivatives through the one-pot reactions. in our study,various phenols and ethyl acetoacetate compound in which we used silica-supported boron sulfonic acid [sio2/b(so4h)3] as a new, highly efficient and tri-functional inorganic brønsted acid catalyst were processed under solvent-free condition and thermal. the catalys...

Effect of Allium sativum Linn. (Alliaceae) (Raw Garlic Extract (RGE)) was studied on free amino acids (FAA) level in female albino rats. The garlic extract was tested in three different doses 1ml, 2ml and 4ml/ kg body weight daily as low, medium and high dose respectively for a period of 7, 14, 21 and 28 days. The significant (P<0.01) increase in Free amino acid (FAA) level was observed when ra...

In this study, silver nanoparticles were chemically synthesized and deposited on glass substrates using a reducing agent of sucrose, at 50°C. Different characterizations including atomic force microscopy (AFM), field emission scanning electron microscopy (FESEM), and Raman spectroscopy were obtained to study silvery substrates. Then, the silvery substrates were used as the SERS substrates to de...

The flooding dose method, which is used to measure tissue protein synthesis, assumes equilibration of the isotopic labeling between the aminoacyl-tRNA pool and the tissue and blood free amino acid pools. However, this has not been verified for a phenylalanine tracer in an in vivo study. We determined the specific radioactivity of [3H]phenylalanine in the aminoacyl-tRNA and the tissue and blood ...

This article focuses on the effect of yeast strains, vintage, and must sugar content amino-acid sparkling wines produced by traditional method. In experiment, concentrations before after secondary fermentation, depending type used (basic wine without fermented with immobilized yeast, classical Champagne yeast) (170, 190, 210 g per liter), vintage (2010 2011), were evaluated. Concentrations 20 f...

Nitrogen balance was studied in growing male SPF-rats fed on diets in which each essential amino acid was varied from zero to about 120% of optimum requirement. From the balance results, optimum and maintenance requirements were estimated as well as the efficiency of utilization of amino acids for growth and growth + maintenance. N balance increased with increasing dietary level of the deficien...

The data presented in this paper emphasize the importance of eliminating bacterial contamination in studies of amino acid incorporation into isolated mitochondria. A correlation between the number of bacteria present and amino acid incorporation into mitochondria was observed when pure cultures of bacteria were added to mitochondria prepared under sterile conditions. Low concentrations of dinit...

sulfonated polystyrene/montmorillonite nanocomposite (ommt/ps-so3h) was prepared and used as a novel, efficient and inexpensive heterogeneous acid catalyst in the one-pot reaction three-component mannich reaction of ketones, aromatic aldehydes and amines under solvent-free conditions. the catalyst was characterized by xrd, sem, tg, bet and ft-ir techniques. this method has advantages of high yi...

an efficient, mild and environmentally friendly method was developed for the strecker reaction to synthesize α-aminonitriles in the presence of methyl imidazolium hydrogen sulfate ([hmim][hso4]) as an efficient catalyst. these syntheses were performed via a one-pot three-component condensation of aldehydes (or ketones), amines, and trimethylsilyl cyanide under mild and solvent free conditions.