During the last decade, several studies have focused on the use of passive multispectral remote sensing to derive the bathymetry in coastal zone. In particular, data acquired with the SPOT and the Landsat TM/ETM+ sensors have been used to derive models of bathymetry at medium scales. Until now, the successful application of passive remote sensing techniques to bathymetry mapping was restricted ...

Microorganisms act both as drivers and indicators of perturbations in the marine environment. In an effort to establish baselines to predict the response of marine habitats to environmental change, here we report a broad survey of microbial diversity across the Indian Ocean, including the first microbial samples collected in the pristine lagoon of Salomon Islands, Chagos Archipelago. This was t...

Jenynsia multidentata is an important component of the fish assemblage of the Patos Lagoon estuary in southern South Brazil. In order to investigate its reproductive cycle and abundance patterns, standardized sampling was conducted over large spatial (marine, estuary and lagoon) and temporal (1996–2003) scales. Both females and males were significantly more abundant during summer (December–Marc...

To monitor the dissemination of resistance genes into the environment, we determined the occurrence of tetracycline resistance (Tc(r)) genes in groundwater underlying two swine confinement operations. Monitoring well networks (16 wells at site A and 6 wells at site C) were established around the lagoons at each facility. Groundwater (n = 124) and lagoon (n = 12) samples were collected from the ...

Understanding how Listeria monocytogenes, the causative agent of listeriosis, adapts to the environment is crucial. Adaptation to new matrices requires regulation of gene expression. To determine how the pathogen adapts to lagoon effluent and soil, two matrices where L. monocytogenes has been isolated, we compared the transcriptomes of L. monocytogenes CIP 110868 20 min and 24 h after its trans...

We investigated local genetic associations among female Pacific common eiders (Somateria mollissima v-nigrum) nesting in a stochastic Arctic environment within two groups of barrier islands (Simpson Lagoon and Mikkelsen Bay) in the Beaufort Sea, Alaska. Nonrandom genetic associations were observed among nesting females using regional spatial autocorrelation analyses for distance classes up to 1...

Daily acoustic calling rates of Eastern North Pacific (ENP) gray whales were measured on 6 days during 1 mo of their 2008 breeding season in the sheltered coastal lagoon of Laguna San Ignacio in Baja California, Mexico. Visual counts of whales determined that the numbers of single animals in the lower lagoon more than tripled over the observation period. All call types showed production peaks i...

Microorganisms are central to both the beneficial (organic degradation, nutrient removal, biogas production) and detrimental (odor production, pathogen contamination) effects of swine waste storage systems. In this study, both quantitative (real-time polymerase chain reaction) and qualitative (denaturing gradient gel electrophoresis, cloning, sequence analysis) molecular analyses were used to t...

Habitat suitability models have been extensively used by conservation planners to estimate the likelihood of occurrence and abundance of threatened wildlife species in terrestrial ecosystems, but they have been rarely applied to aquatic environment. In this study a GIS-based habitat suitability (HS) model has been developed to identify suitable sites for Manila clam (Tapes philippinarum) farmin...

Many studies in marine coastal lagoons have focused on the marine-to-terrestrial gradient as a main source of variation for the structure of assemblages. In this paper, the magnitude of differences among locations arranged along the marine-to-terrestrial gradient of the western lagoon of Orbetello (Grosseto, Italy) was contrasted with the amount of spatial variability occurring among sets of lo...