نتایج جستجو برای: shotgun

تعداد نتایج: 3944  

2011
Joseph K. Bradley Aapo Kyrola Danny Bickson Carlos Guestrin

We propose Shotgun, a parallel coordinate descent algorithm for minimizing L1regularized losses. Though coordinate descent seems inherently sequential, we prove convergence bounds for Shotgun which predict linear speedups, up to a problemdependent limit. We present a comprehensive empirical study of Shotgun for Lasso and sparse logistic regression. Our theoretical predictions on the potential f...

Journal: :Proteins 2003
Daniel Fischer

The performance of the 3DS3 and 3DS5 3D-SHOTGUN meta-predictors in CAFASP3 is reported. The 3D-SHOTGUN meta-predictors are fully automatic fold recognition servers that attempt to incorporate into the prediction process a number of successful strategies that human predictors often apply. Namely, the input to 3D-SHOTGUN are the top five models predicted by a number of independent fold recognitio...

Journal: :Molecular & Cellular Proteomics 2007

Journal: :Cases Journal 2008
Konstantinos G Toutouzas Andreas Larentzakis Panagiotis Drimousis Maria Riga Dimitrios Theodorou Stylianos Katsaragakis

INTRODUCTION One of the most lethal mechanisms of injury is shotgun wound and particularly the abdominal one. CASE PRESENTATION We report a case of a 45 years old male suffering abdominal shotgun trauma, who survived his injuries. CONCLUSION The management of the abdominal shotgun wounds is mainly dependent on clinical examination and clinical judgment, while requires advanced surgical skills.

Journal: :Chemistry & biology 2004
Ken Sato Matthew D Simon Aron M Levin Kevan M Shokat Gregory A Weiss

Phage-displayed alanine shotgun scanning was used to dissect contributions by engrailed homedomain (En-HD) residues 17 through 46, which indirectly influence recognition of DNA. The relative contributions of such indirect contacts, quantified by shotgun scanning, highlight previously unexplored En-HD residues. Two motifs dominate En-HD function in this region. First, two surface-exposed aromati...

Journal: :Journal of proteomics 2010
Joshua M Gilmore Michael P Washburn

The emergence of shotgun proteomics has facilitated the numerous biological discoveries made by proteomic studies. However, comprehensive proteomic analysis remains challenging and shotgun proteomics is a continually changing field. This review details the recent developments in shotgun proteomics and describes emerging technologies that will influence shotgun proteomics going forward. In addit...

Journal: :Legal medicine 2014
Kazuki Harada Yasuhiro Itoi Yoshimasa Kanawaku Takako Nakatsumi Jun Kanetake

Injuries by handcrafted firearms are uncommon, and those by handcrafted shotguns are very rare. We present an unusual case of suicide using a handcrafted shotgun and slug. A 73-year-old male, who was a glass-grinding artisan, was found dead at a workshop on the premises of his residence. Autopsy showed a contact shotgun wound to the forehead, which perforated the cranium and caused extensive da...

Journal: :IEEE journal on selected areas in information theory 2022

Most DNA sequencing technologies are based on the shotgun paradigm: many short reads obtained from random unknown locations in sequence. A fundamental question, Motahari et al. , (2013), is what read length and coverage depth (i.e., total number of reads) needed to guarantee reliable sequence r...

Journal: :Bioinformatics 2001
Daniel H. Huson Knut Reinert Saul A. Kravitz Karin A. Remington Arthur L. Delcher Ian M. Dew Michael Flanigan Aaron L. Halpern Zhongwu Lai Clark M. Mobarry Granger G. Sutton Eugene W. Myers

Two different strategies for determining the human genome are currently being pursued: one is the "clone-by-clone" approach, employed by the publicly funded project, and the other is the "whole genome shotgun assembler" approach, favored by researchers at Celera Genomics. An interim strategy employed at Celera, called compartmentalized shotgun assembly, makes use of preliminary data produced by...

Journal: :Science 2002
Jun Yu Songnian Hu Jun Wang Gane Ka-Shu Wong Songgang Li Bin Liu Yajun Deng Li Dai Yan Zhou Xiuqing Zhang Mengliang Cao Jing Liu Jiandong Sun Jiabin Tang Yanjiong Chen Xiaobing Huang Wei Lin Chen Ye Wei Tong Lijuan Cong Jianing Geng Yujun Han Lin Li Wei Li Guangqiang Hu Xiangang Huang Wenjie Li Jian Li Zhanwei Liu Long Li Jianping Liu Qiuhui Qi Jinsong Liu Li Li Tao Li Xuegang Wang Hong Lu Tingting Wu Miao Zhu Peixiang Ni Hua Han Wei Dong Xiaoyu Ren Xiaoli Feng Peng Cui Xianran Li Hao Wang Xin Xu Wenxue Zhai Zhao Xu Jinsong Zhang Sijie He Jianguo Zhang Jichen Xu Kunlin Zhang Xianwu Zheng Jianhai Dong Wanyong Zeng Lin Tao Jia Ye Jun Tan Xide Ren Xuewei Chen Jun He Daofeng Liu Wei Tian Chaoguang Tian Hongai Xia Qiyu Bao Gang Li Hui Gao Ting Cao Juan Wang Wenming Zhao Ping Li Wei Chen Xudong Wang Yong Zhang Jianfei Hu Jing Wang Song Liu Jian Yang Guangyu Zhang Yuqing Xiong Zhijie Li Long Mao Chengshu Zhou Zhen Zhu Runsheng Chen Bailin Hao Weimou Zheng Shouyi Chen Wei Guo Guojie Li Siqi Liu Ming Tao Jian Wang Lihuang Zhu Longping Yuan Huanming Yang

We have produced a draft sequence of the rice genome for the most widely cultivated subspecies in China, Oryza sativa L. ssp. indica, by whole-genome shotgun sequencing. The genome was 466 megabases in size, with an estimated 46,022 to 55,615 genes. Functional coverage in the assembled sequences was 92.0%. About 42.2% of the genome was in exact 20-nucleotide oligomer repeats, and most of the tr...

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