The DØ experiment is facing many exciting challenges providing a computing environment for its worldwide collaboration. Transparent access to data for processing and analysis has been enabled through deployment of its SAM system to collaborating sites and additional functionality will be provided soon with SAMGrid components. In order to maximize access to global storage, computational and inte...

3 How to build proBAM file 3 3.1 Preparing annotation files . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3 3.2 Preparing PSMs table . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4 3.3 Generate SAM file using PSMtab2SAM . . . . . . . . . . . . . . . . . . . . . . . . . . . 5 3.4 Convert SAM file to BAM and index . . . . . . . . . . . . . . . . . . . ....

Yan, an ETS family transcriptional repressor, is regulated by receptor tyrosine kinase signaling via the Ras/MAPK pathway. Phosphorylation and downregulation of Yan is facilitated by a protein called Mae. Yan and Mae interact through their SAM domains. We find that repression by Yan requires the formation of a higher order structure mediated by Yan-SAM polymerization. Moreover, a crystal struct...

This research was performed with the objective of evaluating the accuracy of spectral angle mapper (SAM) classification using different reference spectra. The Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) digital images were applied in the SAM classification in order to map the distribution of hydrothermally altered rocks in the Kerman Cenozoic magmatic arc (KCMA), Iran...