نتایج جستجو برای: rnahybrid

تعداد نتایج: 39  

Journal: :Wuhan University Journal of Natural Sciences 2023

Islet-1 (Isl1), a LIM homeodomain protein, is expressed in the embryonic pancreatic epithelium. As key transcription factor, Isl1 can not only regulate insulin gene expression normal glucose condition but also maintain β-cell function and impact target genes. Some experiments have suggested that MicroRNA (miRNA) play critical role during induction of insulin-producing cells (IPCs). However, it ...

Journal: :J. Comput. Science 2014
Sasitorn Plakunmonthon Nattanan Panjaworayan T.-Thienprasert Kritsada Khongnomnan Yong Poovorawan Sunchai Payungporn

Hepatitis C virus (HCV) infection causes acute and chronic hepatitis leading to cirrhosis and hepatocellular carcinoma which are the major health problems around the world including Thai population. Many recent studies were shown an important role of microRNA (miRNA) to inhibit or promote viral replication. This study aimed to investigate human miRNAs and analyze hybridization patterns between ...

2017
Sirjana Shrestha Chi-Dung Yang Hsiao-Chin Hong Chih-Hung Chou Chun-San Tai Men-Yee Chiew Wen-Liang Chen Shun-Long Weng Chung-Chu Chen Yi-An Chang Meng-Lin Lee Wei-Yun Huang Sheng-Da Hsu Yi-Chang Chen Hsien-Da Huang

Gastric cancer (GC) is the second most frequent cause of cancer-related deaths worldwide. MicroRNAs are single-stranded RNA molecules of 21-23 nucleotides that regulate target gene expression through specific base-pairing interactions between miRNA and untranslated regions of targeted mRNAs. In this study, we generated a multistep approach for the integrated analysis of miRNA and mRNA expressio...

2017
Wipaporn Wongfieng Amonrat Jumnainsong Yaovalux Chamgramol Banchob Sripa Chanvit Leelayuwat

The treatment of cancer through the induction of natural killer group 2, member D (NKG2D) ligands is of interest, but understanding of mechanisms controlling expression of individual ligand is limited. The major histocompatibility complex (MHC) class I chain related protein B (MICB) is a member of NKG2D ligands. We aimed to investigate the role of 3'-untranslated (3'-UTR) and 5'-untranslated re...

2008
Sheng-Da Hsu Chia-Huei Chu Ann-Ping Tsou Shu-Jen Chen Hua-Chien Chen Paul Wei-Che Hsu Yung-Hao Wong Yi-Hsuan Chen Gian-Hung Chen Hsien-Da Huang

MicroRNAs (miRNAs) are small non-coding RNA molecules that can negatively regulate gene expression and thus control numerous cellular mechanisms. This work develops a resource, miRNAMap 2.0, for collecting experimentally verified microRNAs and experimentally verified miRNA target genes in human, mouse, rat and other metazoan genomes. Three computational tools, miRanda, RNAhybrid and TargetScan,...

2011
Lixin Zhang Peggy S. Sullivan Jerry C. Goodman Preethi H. Gunaratne Dario Marchetti

Heparanase (HPSE) is a potent protumorigenic, proangiogenic, and prometastatic enzyme that is overexpressed in brain metastatic breast cancer (BMBC). However, little is known about the regulation of this potential therapeutic target in BMBC, which remains very poorly managed in the clinic. We hypothesized that HPSE gene expression might be regulated by micro RNA that might be exploited therapeu...

2008
Sung-Chou Li Cheng-Kai Shiau Wen-chang Lin

MicroRNAs have been found in various organisms and play essential roles in gene expression regulation of many critical cellular processes. Large-scale computational prediction of miRNAs has been conducted for many organisms using known genomic sequences; however, there has been no such effort for the thousands of known viral genomes. Some viruses utilize existing host cellular pathways for thei...

2012
Assel Issabekova Olga Berillo Mireille Regnier Ivashchenko Anatoly

miRNAs regulate gene expression by binding with mRNAs of many genes. Studying their effects on genes involved in oncogenesis is important in cancer diagnostics and therapeutics. The RNAHybrid 2.1 program was used to predict the strong miRNA binding sites (p < 0.0005) in target mRNAs. The program Finder 2.2 was created to verify 784 intergenic miRNAs (ig-miRNA) origin. Among 54 considered oncoge...

Journal: :Antiviral research 2010
Jun Qian Aixia Zhai Wenping Kao Yujun Li Wuqi Song Yingmei Fu Xiaobei Chen Qingmeng Zhang Jing Wu Hui Li Zhaohua Zhong Hong Ling Fengmin Zhang

Using RNAhybrid software we found the predicted binding of complementary sequences between miR-122 and viral mRNAs, may be important for the antiviral effect of miR-122 on Borna disease virus (BDV). A moderate expression of miR-122 was identified in human oligodendroglial cells (OL), but with a much lower level of miR-122 in BDV persistent infection (OL/BDV) and cells transfected with BDV gene ...

2015
Rui-Song Ye Meng Li Qi-En Qi Xiao Cheng Ting Chen Chao-Yun Li Song-Bo Wang Gang Shu Li-Na Wang Xiao-Tong Zhu Qing-Yan Jiang Qian-Yun Xi Yong-Liang Zhang Geraldo A. Passos

The anterior pituitary is the most important endocrine organ modulating animal postnatal growth, mainly by controlling growth hormone (GH) gene transcription, synthesis, and secretion. As an ideal model for animal postnatal growth studies, the Bama minipig is characterized as having a lower growth performance and fewer individual differences compared with larger pig breeds. In this study, anter...

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