We present a numerical study of the effect of DNA translocation on the ionic current through a nanopore. We use a coarse-grained model to solve the electrokinetic equations at the Poisson-Boltzmann level for the microions, coupled to a lattice-Boltzmann equation for the solvent hydrodynamics. In most cases, translocation leads to a reduction in the ionic current. However, at low salt concentrat...

We have developed a single-compartment, electrophysiological, hypoglossal motoneuron (HM) model based primarily on experimental data from neonatal rat HMs. The model is able to reproduce the fine features of the HM action potential: the fast afterhyperpolarization, the afterdepolarization, and the medium-duration afterhyperpolarization (mAHP). The model also reproduces the repetitive firing pro...

A conical nanopore was developed that allowed the ionic current to be gated by external application of electrical potential. A numerical model of the pore was created in COMSOL to elucidate the mechanism of action in this pore. The model is composed of a conical nanopore geometry with a gold-plated Si3N4 structure and a complete Gouy-Chapman-Stern electrical double layer. The Poisson, NernstPla...

We report a method for simultaneous ionic current measurements of single molecules across up to 16 solid state nanopore channels. Each device, costing less than $20, contains 16 glass nanopores made by laser assisted capillary pulling. We demonstrate simultaneous multichannel detection of double stranded DNA and trapping of DNA origami nanostructures to form hybrid nanopores.

Body surface electrocardiograms and electrograms recorded from the surfaces of the heart are the basis for diagnosis and treatment of cardiac electrophysiological disorders and arrhythmias. Given recent advances in understanding the molecular mechanisms of arrhythmia, it is important to relate these electrocardiographic waveforms to cellular electrophysiological processes. This modeling study e...

introduction: some dental sealers have neurotoxic effects on neuronaltissues. these effects appear to be mediated through the inhibition of ionic channels. intracellular recording was performed on neuronal cells tocharacterize the underlying ionic mechanisms of neurotoxicity induced by roth 801. materials and methods: experiments were carried out on f1 neuronal soma membrane located in the righ...

Recovery from inactivation of T-type Ca channels is slow and saturates at moderate hyperpolarizing voltage steps compared with Na channels. To explore this unique kinetic pattern we measured gating and ionic currents in two closely related isoforms of T-type Ca channels. Gating current recovers from inactivation much faster than ionic current, and recovery from inactivation is much more voltage...

Bursting pacemaker neurons of Tritonia and Aplysia were studied in voltage-clamp experiments to determine the ionic requirements of the slow outward tail current. This current is important for terminating bursts and hyperpolarizing the neuron during the interval between bursts and therefore contributes to the timing of pacemaker activity. A method for rapid extracellular perfusion of the neuron...

Since HODGKIN et al. (1949) first recorded membrane ionic currents by the technique of voltage clamping the membrane of squid giant axons, it has been possible to predict precisely the ionic currents produced by an action potential. However, the ionic current produced during the propagating action potential can be obtained only after intricate experiments and laborious calculations. Employing t...