4 Gene set overrepresentation and enrichment analysis 6 4.1 Prepare the input data . . . . . . . . . . . . . . . . . . . . . . 6 4.2 Initialize and preprocess . . . . . . . . . . . . . . . . . . . . . 7 4.3 Perform analyses . . . . . . . . . . . . . . . . . . . . . . . . . 8 4.4 Summarize results . . . . . . . . . . . . . . . . . . . . . . . . 9 4.5 Plot significant gene sets . . . . . . . . . ...

How can second language teachers retrieve texts that are rich in terms of the grammatical constructions to be taught, but also address the content of interest to the learners? We developed an Information Retrieval system that identifies the 87 grammatical constructions spelled out in the official English language curriculum of schools in Baden-Württemberg (Germany) and reranks the search result...

Enriched social and physical housing produces many molecular, anatomical, electrophysiological and behavior benefits even in adult animals. Much less is known of its effects on cortical electrophysiology, especially in how sensory cortex encodes the altered environment, and extant studies have generally been restricted to neurons in input laminae in sensory cortex. To extend the understanding o...

This document provides technical detail on the use of the gCMAPWeb package, including a short description of input and output data and the configuration of the web application. For expanded examples using real biological datasets available from public databases, please refer to the tutorial vignette instead.

this article present the result from a study of two sediment cores collected from theenvironmentally distinct zones of ces. accumulation status of five toxic metals: cadmium (cd), chromium(cr), cobalt (co), copper (cu) and lead (pb) were analyzed. besides texture and chns were determined tounderstand the composition of the sediment. enrichment factor (ef) and anthropogenic factor (af) wereused ...

Growing concern over the ecological consequence of phosphorus (P) enrichment in freshwater wetlands has elicited considerable debate over the concentration of water column P associated with eutrophication. In the oligotrophic Everglades, the displacement of native communities by enriched ones is widespread and has occurred at sites experiencing only minimal elevations in P input. To help define...

* Greater fine-root production under elevated [CO2] may increase the input of carbon (C) and nitrogen (N) to the soil profile because fine root populations turn over quickly in forested ecosystems. * Here, the effect of elevated [CO)] was assessed on root biomass and N inputs at several soil depths by combining a long-term minirhizotron dataset with continuous, root-specific measurements of roo...