نتایج جستجو برای: gene signature

تعداد نتایج: 1195406  

Journal: :International journal of oncology 2010
Shruti Rathnagiriswaran Ying-Wooi Wan Jame Abraham Vincent Castranova Yong Qian Nancy L Guo

It remains a critical issue to improve the survival rate in patients with recurrent or metastatic breast cancer. This study sought to develop a prognostic scheme based on a 28-gene signature in a broad patient population, including those with advanced disease. Clinically annotated transcriptional profiles of 1,734 breast cancer patients were obtained to validate the 28-gene signature in prognos...

Journal: :Journal of the National Cancer Institute 2006
Marc Buyse Sherene Loi Laura van't Veer Giuseppe Viale Mauro Delorenzi Annuska M Glas Mahasti Saghatchian d'Assignies Jonas Bergh Rosette Lidereau Paul Ellis Adrian Harris Jan Bogaerts Patrick Therasse Arno Floore Mohamed Amakrane Fanny Piette Emiel Rutgers Christos Sotiriou Fatima Cardoso Martine J Piccart

BACKGROUND A 70-gene signature was previously shown to have prognostic value in patients with node-negative breast cancer. Our goal was to validate the signature in an independent group of patients. METHODS Patients (n = 307, with 137 events after a median follow-up of 13.6 years) from five European centers were divided into high- and low-risk groups based on the gene signature classification...

2008
Manuela Hummel Klaus H. Metzeler Christian Buske Stefan K. Bohlander Ulrich Mansmann

BACKGROUND The development of expression-based gene signatures for predicting prognosis or class membership is a popular and challenging task. Besides their stringent validation, signatures need a functional interpretation and must be placed in a biological context. Popular tools such as Gene Set Enrichment have drawbacks because they are restricted to annotated genes and are unable to capture ...

2016
Muhammad Shahid Tae Gyu Choi Minh Nam Nguyen Abel Matondo Yong Hwa Jo Ji Youn Yoo Ngoc Ngo Yen Nguyen Hyeong Rok Yun Jieun Kim Salima Akter Insug Kang Joohun Ha Chi Hoon Maeng Si-Young Kim Ju-seog Lee Jayoung Kim Sung Soo Kim

Identification of a potential gene signature for improved diagnosis in non-small cell lung cancer (NSCLC) patient is necessary. Here, we aim to establish and validate the prognostic efficacy of a gene set that can predict prognosis and benefits of adjuvant chemotherapy (ACT) in NSCLC patients from various ethnicities. An 8-gene signature was calculated from the gene expression of 181 patients u...

2014
Monica Mannelqvist Elisabeth Wik Ingunn M. Stefansson Lars A. Akslen

AIMS Vascular invasion by tumor cells is known to be important for cancer progression. By microarray and qPCR analyses, we earlier identified an 18-gene signature associated with vascular involvement in endometrial cancer. Here, we explored the significance of this vascular invasion signature in multiple series of breast cancer patients. METHODS AND RESULTS The study includes 11 open access g...

2014
Zhi-Qiang Yin Jian-Jun Liu Ying-Chun Xu Jian Yu Guo-Hui Ding Feng Yang Lei Tang Bao-Hong Liu Yue Ma Yu-Wei Xia Xiao-Lin Lin Hong-Xia Wang

PURPOSE The aim of this study was to evaluate the ability of a 41-gene signature derived from breast cancer stem cells (BCSCs) to estimate the risk of metastasis and survival in breast cancer patients. METHODS The centroid expression of the 41-gene signature derived from BCSCs was applied as the threshold to classify patients into two separate groups--patients with high expression (high-EL) o...

Journal: :Journal of Orthopaedic Research 2013

Journal: :Molecular Biology and Evolution 2008
Bas E. Dutilh Berend Snel Thijs J. G. Ettema Martijn A. Huynen

Gene content has been shown to contain a strong phylogenetic signal, yet its usage for phylogenetic questions is hampered by horizontal gene transfer and parallel gene loss and until now required completely sequenced genomes. Here, we introduce an approach that allows the phylogenetic signal in gene content to be applied to any set of sequences, using signature genes for phylogenetic classifica...

2011
Kuk Young Na Ku Sang Kim Jeong Eon Lee Hee Jeong Kim Jung-Hyun Yang Sei-Hyun Ahn Byung-In Moon Ra Mi Kim Si Mon Ko Yong Sik Jung

PURPOSE A 70-gene prognostic signature has prognostic value in patients with node-negative breast cancer in Europe. This diagnostic test known as "MammaPrint™ (70-gene prognostic signature)" was recently validated and implementation was feasible. Therefore, we assessed the 70-gene prognostic signature in Korean patients with breast cancer. We compared the risk predicted by the 70-gene prognosti...

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