نتایج جستجو برای: escape mutant

تعداد نتایج: 159232  

Journal: :Journal of virology 2007
Liyen Loh C Jane Batten Janka Petravic Miles P Davenport Stephen J Kent

The kinetics of immune escape and reversion depend upon the efficiency of CD8 cytotoxic T lymphocytes (CTL) and the fitness cost of escape mutations. Escape kinetics of three simian immunodeficiency virus Gag CTL epitopes in pigtail macaques were variable; those of KP9 and AF9 were faster than those of KW9. Kinetics of reversion of escape mutant virus to wild type upon passage to naïve major hi...

2012
Jeanette Reece Janka Petravic Mehala Balamurali Liyen Loh Shayarana Gooneratne Rob De Rose Stephen J. Kent Miles P. Davenport

Persistence of HIV DNA presents a major barrier to the complete control of HIV infection under current therapies. Most studies suggest that cells with latently integrated HIV decay very slowly under therapy. However, it is much more difficult to study the turnover and persistence of HIV DNA during active infection. We have developed an "escape clock" approach for measuring the turnover of HIV D...

Journal: :Molecular biology and evolution 2010
Jelle Matthijnssens Elisabeth Heylen Mark Zeller Mustafizur Rahman Philippe Lemey Marc Van Ranst

Rotaviruses (RVs) are responsible for more than 600,000 child deaths each year. The worldwide introduction of two life oral vaccines RotaTeq and Rotarix is believed to reduce this number significantly. Before the licensing of both vaccines, two new genotypes, G9 and G12, emerged in the human population and were able to spread across the entire globe in a very short time span. To quantify the VP...

Journal: :Cell 2014
Feng Gao Mattia Bonsignori Hua-Xin Liao Amit Kumar Shi-Mao Xia Xiaozhi Lu Fangping Cai Kwan-Ki Hwang Hongshuo Song Tongqing Zhou Rebecca M. Lynch S. Munir Alam M. Anthony Moody Guido Ferrari Mark Berrong Garnett Kelsoe George M. Shaw Beatrice H. Hahn David C. Montefiori Gift Kamanga Myron S. Cohen Peter Hraber Peter D. Kwong Bette T. Korber John R. Mascola Thomas B. Kepler Barton F. Haynes

Development of strategies for induction of HIV-1 broadly neutralizing antibodies (bnAbs) by vaccines is a priority. Determining the steps of bnAb induction in HIV-1-infected individuals who make bnAbs is a key strategy for immunogen design. Here, we study the B cell response in a bnAb-producing individual and report cooperation between two B cell lineages to drive bnAb development. We isolated ...

Ali Ahmad Bayat Amir Hassan Zarnani Azam Roohi Fazel Shokri, Forough Golsaz Shirazi Gholam Ali Kardar Hamed Mohammadi Jalal Khoshnoodi Mahmood Jeddi-Tehrani, Mohammad Mehdi Amiri

Background: The antibody response to hepatitis B surface antigen (HBsAg) controls hepatitis B virus infection. The "a" determinant of HBsAg is the most important target for protective antibody response, diagnosis and immunoprophylaxis. Mutations in this area may induce immune escape mutants and affect the performance of HBsAg assays. Objectives: To construct clinically relevant recombinant muta...

Journal: :Science 2017
Yevgeniya Nusinovich

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2002
Alexandra Trkola Shawn E Kuhmann Julie M Strizki Elizabeth Maxwell Tom Ketas Tom Morgan Pavel Pugach Serena Xu Lisa Wojcik Jayaram Tagat Anandan Palani Sherry Shapiro John W Clader Stuart McCombie Gregory R Reyes Bahige M Baroudy John P Moore

To study HIV-1 escape from a coreceptor antagonist, the R5 primary isolate CC1/85 was passaged in peripheral blood mononuclear cells with increasing concentrations of the CCR5-specific small molecule inhibitor, AD101. By 19 passages, an escape mutant emerged with a >20,000-fold resistance to AD101. This virus was cross-resistant to a related inhibitor, SCH-C, and partially resistant to RANTES b...

Journal: :PLoS Pathogens 2008
Liyen Loh Janka Petravic C. Jane Batten Miles P Davenport Stephen J Kent

CD8+ cytotoxic T lymphocytes (CTL) can be effective at controlling HIV-1 in humans and SIV in macaques, but their utility is partly offset by mutational escape. The kinetics of CTL escape and reversion of escape mutant viruses upon transmission to MHC-mismatched hosts can help us understand CTL-mediated viral control and the fitness cost extracted by immune escape mutation. Traditional methods ...

2017
David K. Cole Anna Fuller Garry Dolton Efthalia Zervoudi Mateusz Legut Kim Miles Lori Blanchfield Florian Madura Christopher J. Holland Anna M. Bulek John S. Bridgeman John J. Miles Andrea J. A. Schauenburg Konrad Beck Brian D. Evavold Pierre J. Rizkallah Andrew K. Sewell

Serial accumulation of mutations to fixation in the SLYNTVATL (SL9) immunodominant, HIV p17 Gag-derived, HLA A2-restricted cytotoxic T lymphocyte epitope produce the SLFNTIAVL triple mutant "ultimate" escape variant. These mutations in solvent-exposed residues are believed to interfere with TCR recognition, although confirmation has awaited structural verification. Here, we solved a TCR co-comp...

Journal: :Journal of virology 2005
Caroline S Fernandez Ivan Stratov Robert De Rose Katrina Walsh C Jane Dale Miranda Z Smith Michael B Agy Shiu-Lok Hu Kendall Krebs David I Watkins David H O'connor Miles P Davenport Stephen J Kent

Escape from specific T-cell responses contributes to the progression of human immunodeficiency virus type 1 (HIV-1) infection. T-cell escape viral variants are retained following HIV-1 transmission between major histocompatibility complex (MHC)-matched individuals. However, reversion to wild type can occur following transmission to MHC-mismatched hosts in the absence of cytotoxic T-lymphocyte (...

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