نتایج جستجو برای: atomic charges

تعداد نتایج: 111098  

2014
Stanislav Geidl Crina-Maria Ionescu Radka Svobodová Vareková Jaroslav Koca

The concept of atomic point charges is well established in theoretical chemistry. Atomic point charges have played an important role in understanding and modeling chemical behavior by allowing to extract and quantify information stored in the molecular electron distribution of chemical compounds. Thus, atomic point charges have been used to estimate reactivity indices, dissociation constants, p...

Journal: :Acta Crystallographica Section A Foundations of Crystallography 2007

Journal: :Journal of Cheminformatics 2014

Journal: :Biopolymers 1997
H Resat P V Maye M Mezei

Different atomic point charge sets are obtained for the alpha R and C7,eq conformations of the alanine dipeptide by fitting the charges of each conformation to the respective ab initio electrostatic potential surfaces both individually and simultaneously, in both the united atom and the all-atom representations. Using these charge sets, the sensitivity of the relative conformational aqueous fre...

Journal: :Journal of computational chemistry 2013
Joakim P. M. Jämbeck Francesca Mocci Alexander Lyubartsev Aatto Laaksonen

Free energies of solvation (ΔG) in water and n-octanol have been computed for common drug molecules by molecular dynamics simulations with an additive fixed-charge force field. The impact of the electrostatic interactions was investigated by computing the partial atomic charges with four methods that all fit the charges from the quantum mechanically determined electrostatic potential (ESP). Due...

2005
Diane Funk

The assignment of atomic charges to a regular computational grid and the interpolation of forces from the grid back to the original atomic positions are crucial steps in a multigrid approach to the calculation of molecular forces. For purposes of grid assignment, atomic charges are modeled as truncated Gaussian distributions. The charge assignment and back interpolation methods are currently bo...

Journal: :Eastern-European Journal of Enterprise Technologies 2015

Journal: :Journal of computational chemistry 2004
Célia Fonseca Guerra Jan-Willem Handgraaf Evert Jan Baerends F. Matthias Bickelhaupt

We present the Voronoi Deformation Density (VDD) method for computing atomic charges. The VDD method does not explicitly use the basis functions but calculates the amount of electronic density that flows to or from a certain atom due to bond formation by spatial integration of the deformation density over the atomic Voronoi cell. We compare our method to the well-known Mulliken, Hirshfeld, Bade...

2018
Richard M. Fogarty Richard P. Matthews Claire R. Ashworth Agnieszka Brandt Robert G. Palgrave Richard A. Bourne Tom Vander Hoogerstraete Patricia A. Hunt Kevin R. J. Lovelock

A combination of X-ray photoelectron spectroscopy (XPS) and near edge X-ray absorption fine structure (NEXAFS) spectroscopy have been used to provide an experimental measure of nitrogen atomic charge in nine ionic liquids (ILs). These experimental results are used to validate charges calculated with three computational methods: charges from electrostatic potentials using a grid-based method (Ch...

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