نتایج جستجو برای: ژنوتایپینگ mlva

تعداد نتایج: 693  

Journal: :Journal of clinical microbiology 2013
Yuan Hu Boqing Li Dazhi Jin Zhigang Cui Xiaoxia Tao Binghua Zhang Jianzhong Zhang

A panel of seven variable-number tandem-repeat (VNTR) markers was selected for Acinetobacter baumannii typing analysis (MLVA-7). Compared with pulsed-field gel electrophoresis (PFGE), MLVA-7 provided greater discrimination. We modified the criteria for MLVA complex assignments proposed previously, and a remarkable congruence between MLVA-7- and PFGE-based strain clustering was observed.

Journal: :Journal of clinical microbiology 2009
G Rasschaert W Vanderhaeghen I Dewaele N Janez X Huijsdens P Butaye M Heyndrickx

This study evaluates the multiple-locus variable-number tandem-repeat assay (MLVA) and pulsed-field gel electrophoresis (PFGE) when using restriction enzymes BstZI, SacII, and ApaI to fingerprint a diverse collection of methicillin (meticillin)-resistant Staphylococcus aureus (MRSA) sequence type 398 (ST398) isolates. These isolates had been characterized previously by multilocus sequence typin...

Journal: :Journal of clinical microbiology 2008
W N Fawley J Freeman C Smith C Harmanus R J van den Berg E J Kuijper M H Wilcox

We compared multilocus variable-number tandem-repeat analysis (MLVA) and macrorestriction endonuclease analysis using pulsed-field gel electrophoresis (PFGE) to determine their utility to identify clusters of Clostridium difficile infection (CDI) among 91 isolates of PCR ribotype 027 (NAP1, for North American pulsed-field type 1) from nine hospitals (and 10 general practitioners associated with...

2010
Christian Jenke Dag Harmsen Thomas Weniger Jörg Rothgänger Eija Hyytiä-Trees Martina Bielaszewska Helge Karch Alexander Mellmann

Multilocus variable number tandem repeat analysis (MLVA) is a subtyping technique for characterizing human pathogenic bacteria such as enterohemorrhagic Escherichia coli (EHEC) O157. We determined the phylogeny of 202 epidemiologically unrelated EHEC O157:H7/H- clinical isolates through 8 MLVA loci obtained in Germany during 1987-2008. Biodiversity in the loci ranged from 0.66 to 0.90. Four of ...

2017
Munyadziwa Muvhali Anthony Marius Smith Andronica Moipone Rakgantso Karen Helena Keddy

BACKGROUND Salmonella enterica serovar Enteritidis (Salmonella Enteritidis) has become a significant pathogen in South Africa, and the need for improved molecular surveillance of this pathogen has become important. Over the years, multi-locus variable-number tandem-repeats analysis (MLVA) has become a valuable molecular subtyping technique for Salmonella, particularly for highly homogenic serot...

2015
Punnida Techaruvichit Hajime Takahashi Mongkol Vesaratchavest Suwimon Keeratipibul Takashi Kuda Bon Kimura

24 Campylobacter jejuni is a common cause of the frequently reported foodborne diseases in 25 the developed and developing nations. This manuscript describes the development of multiple26 locus variable number tandem repeat analysis (MLVA) using capillary electrophoresis as a novel 27 typing method for microbial source tracking and epidemiological investigation of C. jejuni. 28 Among 36 tandem ...

Journal: :Journal of clinical microbiology 2007
D Boxrud K Pederson-Gulrud J Wotton C Medus E Lyszkowicz J Besser J M Bartkus

Strain subtyping is an important tool for detection of outbreaks caused by Salmonella enterica serotype Enteritidis. Current subtyping methods, however, yield less than optimal subtype discrimination. In this study, we describe the development and evaluation of a multiple-locus variable-number tandem repeat analysis (MLVA) method for subtyping Salmonella serotype Enteritidis. The discrimination...

2013
Véronique Wuyts Wesley Mattheus Guillaume De Laminne de Bex Christa Wildemauwe Nancy H. C. Roosens Kathleen Marchal Sigrid C. J. De Keersmaecker Sophie Bertrand

Surveillance of Salmonella enterica subsp. enterica serovar Typhimurium (S. Typhimurium) is generally considered to benefit from molecular techniques like multiple-locus variable-number of tandem repeats analysis (MLVA), which allow earlier detection and confinement of outbreaks. Here, a surveillance study, including phage typing, antimicrobial susceptibility testing and the in Europe most comm...

2017
Abu S Mustafa Nazima Habibi Amr Osman Faraz Shaheed Mohd W Khan

Brucellosis is a zoonotic disease of major concern in Kuwait and the Middle East. Human brucellosis can be caused by several Brucella species with varying degree of pathogenesis, and relapses are common after apparently successful therapy. The classical biochemical methods for identification of Brucella are time-consuming, cumbersome, and provide information limited to the species level only. I...

Journal: :Journal of medical microbiology 2006
Andrew Slack Meegan Symonds Michael Dohnt Lee Smythe

In this study, an improved multiple-locus variable number of tandem repeats analysis (MLVA) method based upon a previously published method is described. Improvements to the method included redesigned primers and PCR conditions, combined with pooled capillary electrophoresis using multicolored dyes. Allele sizes were converted into an allele string, and each unique allele string was assigned a ...

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