A fundamental challenge in calcium imaging has been to infer spike rates of neurons from the measured noisy fluorescence traces. We systematically evaluate different spike inference algorithms on a large benchmark dataset (>100,000 spikes) recorded from varying neural tissue (V1 and retina) using different calcium indicators (OGB-1 and GCaMP6). In addition, we introduce a new algorithm based on...

A central finding in many cortical areas is that single neurons can match behavioral performance in the discrimination of sensory stimuli. However, whether this is true for natural behaviors involving complex natural stimuli remains unknown. Here we use the model system of songbirds to address this problem. Specifically, we investigate whether neurons in field L, the homolog of primary auditory...

October 2017 d Vol. 175 d No. 2 On the Cover: The architecture of wheat inflorescence and its complexity are among the most important agronomic traits that influence yield. Wheat spikes vary considerably in the number of spikelets, which are specialized reproductive branches. The large and repetitive nature of the three homologous and highly similar subgenomes of wheat has impeded attempts at u...

Correlated spiking has been widely observed, but its impact on neural coding remains controversial. Correlation arising from comodulation of rates across neurons has been shown to vary with the firing rates of individual neurons. This translates into rate and correlation being equivalently tuned to the stimulus; under those conditions, correlated spiking does not provide information beyond that...

Sequential stimulation of the granular layer of the cerebellar cortex in vitro using 11 linearly aligned stimulating electrodes leads to massive population activity in the parallel fiber system and to spike activity in Purkinje cells (Heck, D., Neurosci. Lett., 157 (1993) 95–98; Heck, D., Naturwissenschaften, 82 (1995) 201–2030). The induced parallel fiber activity, however, might have been a r...

Introduction: Over the last decade, exposure to non-ionizing electromagnetic waves due to base station antenna has increased. This in vivo study was planned for evaluating the effects of whole-body exposure to 950 MHz field of GSM mobile phone system on rat dentate gyrus long-term potentiation. Materials and Methods: 24 naive male Wistar rats (3 month old, 225|¡|25 g) were randomly divided in t...

We propose a Markov process model for spike-frequency adapting neural ensembles that synthesizes existing mean-adaptation approaches, population density methods, and inhomogeneous renewal theory, resulting in a unified and tractable framework that goes beyond renewal and mean-adaptation theories by accounting for correlations between subsequent interspike intervals. A method for efficiently gen...

Hippocampal dentate gyrus reactivity to perforant path (PP) stimulation in the anesthetized rat was enhanced after systemic administration of the serotonin-releasing drug fenfluramine (FFA). This effect of FFA was mimicked by local application of the drug via the recording pipette, indicating that the effect of FFA is mediated by release of serotonin from intrahippocampal serotonergic terminals...

The effect of acute intrahippocampal infusion of brain-derived neurotrophic factor (BDNF) on synaptic transmission in the dentate gyrus was investigated in urethan-anesthetized rats. Medial perforant path-evoked field potentials were recorded in the dentate hilus and BDNF-containing buffer was infused (4 microl, 25 min) immediately above the dentate molecular layer. BDNF led to a slowly develop...

Auditory receptor neurons of crickets are most sensitive to either low or high sound frequencies. Earlier work showed that the temporal coding properties of first-order auditory interneurons are matched to the temporal characteristics of natural low- and high-frequency stimuli (cricket songs and bat echolocation calls, respectively). We studied the temporal coding properties of receptor neurons...