Interaction enthalpies for six base pairs have been computed at a variety of efficient levels of electronic structure theory and compared to experiment. In addition to previously defined levels of theory, modified Hamiltonians with adjusted parameters in hybrid Hartree-Fock/density functionals and semiempirical neglect-of-diatomic-differential-overlap models were examined. Of the pure and hybri...

The capillary electrophoretic behavior of 44 aromatic organic ions was investigated. The observed ionic radii (r(obs0)) for the aromatic organic ions were obtained from the electrophoretic mobilities of sodium tetraborate (pH 9.2), potassium tetraborate (pH 9.2), ammonium borate (pH 9.2), and trisodium phosphate (pH 11.7) buffers with zero ionic strength. The linear relationships between the r(...

A structure-activity relationship of dopamine and 3-benzazepine derivatives is discussed, using theoretically calculated results. In order to clearly divide dopamines and 3-benzazepines into a strongly active and a weakly active group, the CC50, two different dipole moments (microESP-G and microESP-W) and heat of formation (deltaHf) of dopamine [1-13] and 3-benzazepine derivatives [14-23] were ...

PM3 semi-empirical method was used to develop the quantitative structure-activity relationship (QSAR) for predicting the anticonvulsant activity of some acetamido-N-benzylacetamide derivative. In order to to find the optimized geometry of the studied molecules, three types of molecular descriptors were used in deriving quantitative relation between anticonvulsant activity and structural propert...

Adsorption of methanol, ethanol, propanol and isopropanol on the -alumina (1 1 0 C) surface is investigated with semiempirical (PM3) cluster calculations. It is found that all four alcohols chemisorb to the alumina surface when they come close to the surface with suitable orientation. The chemisorption is an exothermic process when the OH hydrogen interacts with a surface oxygen atom that is in...

The role of ribokinase-like carbohydrate kinases consists in ATP dependent phosphorylation of small molecules containing hydroxymethyl group. Although they differ substantially in structural terms and exhibit a broad substrate specificity, some family-wide conserved features can be distinguished suggesting the common mode of action. 4-methyl-5-hydroxyethylthiazole kinase (Thz kinase) was chose...

Group-theoretical methods are used to enumerate the structures of ordered perovskites, in which 1:2 and 1:3 ordering of B and B' cations is considered in combination with the ubiquitous BX6 (or B'X6) octahedral tilting. The cation ordering on the B-cation site is described by irreducible representations of the Pm3 m space group of the cubic aristotype: Lambda1 (k = 1/3,1/3,1/3) for the cation o...

Hydrogenases which catalyze the H(2)↔ 2H(+) + 2e(-) reaction are metalloenzymes that can be divided into two classes, the NiFe and Fe enzymes, on the basis of their metal content. Iron-sulfur clusters [2Fe-2S] and [4Fe-4S] are common in ironhydrogenases. In the present model study, [2Fe-2S] cluster has been considered to visualize the effect of external electric field on various quantum chemica...

A structure-activity relationship of the cytotoxic activity of tropolone derivatives was discussed, using theoretical calculations. In order to clearly divide the tropolones into two structurally analogous groups, four different dipole moments (muG, muESP-G, muW and muESP-W) and heats of formation (deltaHf) of the tropolones [1-21] were calculated in the gas-phase and in water-solution by the c...

The Al(III) and Ga(III) complexes formed by morin (M) in aqueous solution were investigated by means of electrospray ionization mass spectrometry (ESI-MS). In the full scan mass spectra, Al:M showed 1:2 and 2:3 stoichiometric ratios. When (S)-N-acetylserine methyl ester (Ser), as a partial mimic of the serine residue in silk, was added to Al:M and Ga:M complexes in aqueous solution, the mass sp...